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DDX3X DEAD-box helicase 3 X-linked [ Acanthisitta chloris (rifleman) ]

Gene ID: 103799362, updated on 3-Aug-2024

Summary

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Gene symbol
DDX3X
Gene description
DEAD-box helicase 3 X-linked
Locus tag
N310_10829
Gene type
protein coding
RefSeq status
MODEL
Organism
Acanthisitta chloris
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Acanthisittidae; Acanthisitta
Annotation information
Annotation category: partial on reference assembly
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
16
Annotation release Status Assembly Chr Location
100 current ASM69581v1 (GCF_000695815.1) Unplaced Scaffold NW_008665307.1 (1067..15312)

NW_008665307.1Genomic Context describing neighboring genes Neighboring gene nyctalopin Neighboring gene calcium/calmodulin dependent serine protein kinase Neighboring gene G protein-coupled receptor 34

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_008665307.1 Unplaced Scaffold Reference ASM69581v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA helicase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell differentiation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in gamete generation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in P granule IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ATP-dependent RNA helicase DDX3X

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Acanthisitta chloris Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM69581v1

Genomic

  1. NW_008665307.1 Reference ASM69581v1

    Range
    1067..15312
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009071676.1 → XP_009069924.1  ATP-dependent RNA helicase DDX3X

    UniProtKB/TrEMBL
    A0A091MM06
    Conserved Domains (3) summary
    cd00268
    Location:159 → 381
    DEADc; DEAD-box helicases. A diverse family of proteins involved in ATP-dependent RNA unwinding, needed in a variety of cellular processes including splicing, ribosome biogenesis and RNA degradation. The name derives from the sequence of the Walker B motif ...
    PTZ00110
    Location:40 → 568
    PTZ00110; helicase; Provisional
    pfam00271
    Location:402 → 513
    Helicase_C; Helicase conserved C-terminal domain
Nucleotide Protein
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