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FRG1 FSHD region gene 1 [ Manacus vitellinus (golden-collared manakin) ]

Gene ID: 103754633, updated on 3-Aug-2024

Summary

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Gene symbol
FRG1
Gene description
FSHD region gene 1
Locus tag
N305_04037
See related
Ensembl:ENSMVIG00005012284
Gene type
protein coding
RefSeq status
MODEL
Organism
Manacus vitellinus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Pipridae; Manacus
Orthologs
human mouse all
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Genomic context

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See FRG1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
9
Annotation release Status Assembly Chr Location
103 current ASM171598v3 (GCF_001715985.3) Unplaced Scaffold NW_021938789.1 (24864729..24872460, complement)
101 previous assembly ASM171598v1 (GCF_001715985.1) Unplaced Scaffold NW_017219393.1 (26049743..26057481, complement)

NW_021938789.1Genomic Context describing neighboring genes Neighboring gene general transcription factor IIE subunit 1 Neighboring gene N-acylsphingosine amidohydrolase 1 Neighboring gene FAT atypical cadherin 1 Neighboring gene melatonin receptor 1A

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables actin filament binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of catalytic step 2 spliceosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleolus IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in striated muscle dense body IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein FRG1
Names
Protein FRG1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Manacus vitellinus Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM171598v3

Genomic

  1. NW_021938789.1 Reference ASM171598v3

    Range
    24864729..24872460 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_029962638.1 → XP_029818498.1  protein FRG1

    UniProtKB/TrEMBL
    A0A093PNT5
    Conserved Domains (1) summary
    pfam06229
    Location:69 → 257
    FRG1; FRG1-like domain
Nucleotide Protein
Heading Accession and Version

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