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PRDM11 PR/SET domain 11 [ Manacus vitellinus (golden-collared manakin) ]

Gene ID: 103753988, updated on 3-Aug-2024

Summary

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Gene symbol
PRDM11
Gene description
PR/SET domain 11
See related
Ensembl:ENSMVIG00005008486
Gene type
protein coding
RefSeq status
MODEL
Organism
Manacus vitellinus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Pipridae; Manacus
Orthologs
human mouse all
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Genomic context

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See PRDM11 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
8
Annotation release Status Assembly Chr Location
103 current ASM171598v3 (GCF_001715985.3) Unplaced Scaffold NW_021940750.1 (2086118..2113058)
101 previous assembly ASM171598v1 (GCF_001715985.1) Unplaced Scaffold NW_017220201.1 (2106949..2133822)

NW_021940750.1Genomic Context describing neighboring genes Neighboring gene tetraspanin 18 Neighboring gene tumor protein p53 inducible protein 11 Neighboring gene myb-related transcription factor, partner of profilin-like Neighboring gene synaptotagmin 13 Neighboring gene astacin-like metalloendopeptidase

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
PR domain-containing protein 11
Names
zinc finger protein 862

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Manacus vitellinus Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM171598v3

Genomic

  1. NW_021940750.1 Reference ASM171598v3

    Range
    2086118..2113058
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008919747.3 → XP_008917995.3  PR domain-containing protein 11 isoform X1

    Conserved Domains (2) summary
    pfam18445
    Location:74 → 100
    zf_PR_Knuckle; PR zinc knuckle motif
    cd19195
    Location:108 → 234
    PR-SET_PRDM11; PR-SET domain found in PR domain zinc finger protein 11 (PRDM11) and similar proteins

  2. XM_018082832.2 → XP_017938321.2  PR domain-containing protein 11 isoform X2

Nucleotide Protein
Heading Accession and Version

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