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Cyfip2 cytoplasmic FMR1 interacting protein 2 [ Nannospalax galili (Upper Galilee mountains blind mole rat) ]

Gene ID: 103745477, updated on 11-Mar-2024

Summary

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Gene symbol
Cyfip2
Gene description
cytoplasmic FMR1 interacting protein 2
See related
Ensembl:ENSNGAG00000017596
Gene type
protein coding
RefSeq status
MODEL
Organism
Nannospalax galili
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Spalacidae; Spalacinae; Nannospalax
Annotation information
Annotation category: partial on reference assembly
Orthologs
human mouse all
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Genomic context

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See Cyfip2 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
31
Annotation release Status Assembly Chr Location
102 current S.galili_v1.0 (GCF_000622305.1) Unplaced Scaffold NW_008350255.1 (226506..361849)

NW_008350255.1Genomic Context describing neighboring genes Neighboring gene golgi associated RAB2 interactor family member 3 Neighboring gene IL2 inducible T cell kinase Neighboring gene fibronectin type III domain containing 9 Neighboring gene NIPA like domain containing 4 Neighboring gene ADAM metallopeptidase domain 19 Neighboring gene uncharacterized LOC115072760

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_008350255 Unplaced Scaffold Reference S.galili_v1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Transcriptome sequencing of the blind subterranean mole rat, Spalax galili: utility and potential for the discovery of novel evolutionary patterns. Malik A, et al. PLoS One, 2011. PMID 21857902, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables small GTPase binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in activation of cysteine-type endopeptidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in apoptotic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in axon guidance IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cell morphogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cell projection assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of actin filament polymerization IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in neuron projection IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in synapse IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cytoplasmic FMR1-interacting protein 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Nannospalax galili Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference S.galili_v1.0 Primary Assembly

Genomic

  1. NW_008350255.1 Reference S.galili_v1.0 Primary Assembly

    Range
    226506..361849
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017801740.2 → XP_017657229.1  cytoplasmic FMR1-interacting protein 2

    UniProtKB/TrEMBL
    A0A8C6RFP8
    Related
    ENSNGAP00000017122.1, ENSNGAT00000022747.1
    Conserved Domains (2) summary
    pfam05994
    Location:388 → 1246
    FragX_IP; Cytoplasmic Fragile-X interacting family
    pfam07159
    Location:65 → 267
    DUF1394; Protein of unknown function (DUF1394)
Nucleotide Protein
Heading Accession and Version

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