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Antxr2 ANTXR cell adhesion molecule 2 [ Nannospalax galili (Upper Galilee mountains blind mole rat) ]

Gene ID: 103742622, updated on 11-Mar-2024

Summary

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Gene symbol
Antxr2
Gene description
ANTXR cell adhesion molecule 2
See related
Ensembl:ENSNGAG00000016913
Gene type
protein coding
RefSeq status
MODEL
Organism
Nannospalax galili
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Spalacidae; Spalacinae; Nannospalax
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
18
Annotation release Status Assembly Chr Location
102 current S.galili_v1.0 (GCF_000622305.1) Unplaced Scaffold NW_008347189.1 (2551613..2721853, complement)

NW_008347189.1Genomic Context describing neighboring genes Neighboring gene U1 spliceosomal RNA Neighboring gene glycerol kinase 2 Neighboring gene pyruvate kinase PKM-like Neighboring gene uncharacterized LOC115072138 Neighboring gene uncharacterized LOC103742623

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_008347189 Unplaced Scaffold Reference S.galili_v1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Transcriptome sequencing of the blind subterranean mole rat, Spalax galili: utility and potential for the discovery of novel evolutionary patterns. Malik A, et al. PLoS One, 2011. PMID 21857902, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables signaling receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
anthrax toxin receptor 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Nannospalax galili Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference S.galili_v1.0 Primary Assembly

Genomic

  1. NW_008347189.1 Reference S.galili_v1.0 Primary Assembly

    Range
    2551613..2721853 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008843696.3 → XP_008841918.1  anthrax toxin receptor 2 isoform X1

    UniProtKB/TrEMBL
    A0A8C6W8P6, A0A8C6W8P7
    Related
    ENSNGAP00000016094.1, ENSNGAT00000021707.1
    Conserved Domains (3) summary
    cd01474
    Location:39 → 221
    vWA_ATR; ATR (Anthrax Toxin Receptor): Anthrax toxin is a key virulence factor for Bacillus anthracis, the causative agent of anthrax. ATR is the cellular receptor for the anthrax protective antigen and facilitates entry of the toxin into cells. The VWA domain in ...
    pfam05586
    Location:394 → 484
    Ant_C; Anthrax receptor C-terminus region
    pfam05587
    Location:216 → 317
    Anth_Ig; Anthrax receptor extracellular domain

  2. XM_029568595.1 → XP_029424455.1  anthrax toxin receptor 2 isoform X2

    Conserved Domains (3) summary
    pfam05586
    Location:322 → 412
    Ant_C; Anthrax receptor C-terminus region
    pfam05587
    Location:144 → 245
    Anth_Ig; Anthrax receptor extracellular domain
    cl00057
    Location:26 → 149
    vWFA; Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF). Typically, the vWA domain is made up of approximately 200 amino acid residues folded into a classic a/b para-rossmann type of ...
Nucleotide Protein
Heading Accession and Version

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