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Btbd9 BTB domain containing 9 [ Nannospalax galili (Upper Galilee mountains blind mole rat) ]

Gene ID: 103739636, updated on 11-Mar-2024

Summary

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Gene symbol
Btbd9
Gene description
BTB domain containing 9
See related
Ensembl:ENSNGAG00000000444
Gene type
protein coding
RefSeq status
MODEL
Organism
Nannospalax galili
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Spalacidae; Spalacinae; Nannospalax
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
12
Annotation release Status Assembly Chr Location
102 current S.galili_v1.0 (GCF_000622305.1) Unplaced Scaffold NW_008343842.1 (797874..1212175)

NW_008343842.1Genomic Context describing neighboring genes Neighboring gene dynein axonemal heavy chain 8 Neighboring gene U6 spliceosomal RNA Neighboring gene glyoxalase I Neighboring gene zinc finger AN1-type containing 3 Neighboring gene uncharacterized LOC103739639

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_008343842 Unplaced Scaffold Reference S.galili_v1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Transcriptome sequencing of the blind subterranean mole rat, Spalax galili: utility and potential for the discovery of novel evolutionary patterns. Malik A, et al. PLoS One, 2011. PMID 21857902, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in adult locomotory behavior IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in circadian behavior IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in modulation of chemical synaptic transmission IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
BTB/POZ domain-containing protein 9

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Nannospalax galili Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference S.galili_v1.0 Primary Assembly

Genomic

  1. NW_008343842.1 Reference S.galili_v1.0 Primary Assembly

    Range
    797874..1212175
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008840045.3 → XP_008838267.1  BTB/POZ domain-containing protein 9 isoform X1

    See identical proteins and their annotated locations for XP_008838267.1

    Conserved Domains (3) summary
    cd18287
    Location:14 → 133
    BTB_POZ_BTBD9; BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in BTB/POZ domain-containing protein 9 (BTBD9)
    cd14822
    Location:137 → 235
    BACK_BTBD9; BACK (BTB and C-terminal Kelch) domain found in BTB/POZ domain-containing protein 9 (BTBD9)
    pfam00754
    Location:292 → 405
    F5_F8_type_C; F5/8 type C domain

  2. XM_029566952.1 → XP_029422812.1  BTB/POZ domain-containing protein 9 isoform X2

    UniProtKB/TrEMBL
    A0A8C6Q966
    Related
    ENSNGAP00000000586.1, ENSNGAT00000000597.1
    Conserved Domains (3) summary
    cd18287
    Location:14 → 133
    BTB_POZ_BTBD9; BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in BTB/POZ domain-containing protein 9 (BTBD9)
    cd14822
    Location:137 → 235
    BACK_BTBD9; BACK (BTB and C-terminal Kelch) domain found in BTB/POZ domain-containing protein 9 (BTBD9)
    pfam00754
    Location:292 → 405
    F5_F8_type_C; F5/8 type C domain

  3. XM_008840044.3 → XP_008838266.1  BTB/POZ domain-containing protein 9 isoform X1

    See identical proteins and their annotated locations for XP_008838266.1

    Conserved Domains (3) summary
    cd18287
    Location:14 → 133
    BTB_POZ_BTBD9; BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in BTB/POZ domain-containing protein 9 (BTBD9)
    cd14822
    Location:137 → 235
    BACK_BTBD9; BACK (BTB and C-terminal Kelch) domain found in BTB/POZ domain-containing protein 9 (BTBD9)
    pfam00754
    Location:292 → 405
    F5_F8_type_C; F5/8 type C domain
Nucleotide Protein
Heading Accession and Version

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