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Uchl1 ubiquitin C-terminal hydrolase L1 [ Nannospalax galili (Upper Galilee mountains blind mole rat) ]

Gene ID: 103729235, updated on 11-Mar-2024

Summary

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Gene symbol
Uchl1
Gene description
ubiquitin C-terminal hydrolase L1
See related
Ensembl:ENSNGAG00000011045
Gene type
protein coding
RefSeq status
MODEL
Organism
Nannospalax galili
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Spalacidae; Spalacinae; Nannospalax
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
9
Annotation release Status Assembly Chr Location
102 current S.galili_v1.0 (GCF_000622305.1) Unplaced Scaffold NW_008332097.1 (2081521..2091914, complement)

NW_008332097.1Genomic Context describing neighboring genes Neighboring gene LIM and calponin homology domains 1 Neighboring gene uncharacterized LOC115069305 Neighboring gene elongation factor 1-gamma-like Neighboring gene elongation factor 1-gamma pseudogene Neighboring gene amyloid beta precursor protein binding family B member 2 Neighboring gene ATP synthase membrane subunit DAPIT, mitochondrial pseudogene Neighboring gene 39S ribosomal protein L32, mitochondrial pseudogene Neighboring gene NOP2/Sun RNA methyltransferase family member 7

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_008332097 Unplaced Scaffold Reference S.galili_v1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Transcriptome sequencing of the blind subterranean mole rat, Spalax galili: utility and potential for the discovery of novel evolutionary patterns. Malik A, et al. PLoS One, 2011. PMID 21857902, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cysteine-type deubiquitinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein deubiquitination IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in ubiquitin-dependent protein catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ubiquitin carboxyl-terminal hydrolase isozyme L1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Nannospalax galili Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference S.galili_v1.0 Primary Assembly

Genomic

  1. NW_008332097.1 Reference S.galili_v1.0 Primary Assembly

    Range
    2081521..2091914 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008827226.3 → XP_008825448.1  ubiquitin carboxyl-terminal hydrolase isozyme L1 isoform X1

    UniProtKB/TrEMBL
    A0A8C6QU67
    Conserved Domains (1) summary
    cd09616
    Location:5 → 231
    Peptidase_C12_UCH_L1_L3; Cysteine peptidase C12 containing ubiquitin carboxyl-terminal hydrolase (UCH) families L1 and L3

  2. XM_008827228.3 → XP_008825450.1  ubiquitin carboxyl-terminal hydrolase isozyme L1 isoform X2

    UniProtKB/TrEMBL
    A0A8C6QT64, A0A8C6QU67
    Related
    ENSNGAP00000007932.1, ENSNGAT00000013424.1
    Conserved Domains (1) summary
    cd09616
    Location:5 → 219
    Peptidase_C12_UCH_L1_L3; Cysteine peptidase C12 containing ubiquitin carboxyl-terminal hydrolase (UCH) families L1 and L3
Nucleotide Protein
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