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Hs6st2 heparan sulfate 6-O-sulfotransferase 2 [ Nannospalax galili (Upper Galilee mountains blind mole rat) ]

Gene ID: 103728771, updated on 11-Mar-2024

Summary

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Gene symbol
Hs6st2
Gene description
heparan sulfate 6-O-sulfotransferase 2
See related
Ensembl:ENSNGAG00000019270
Gene type
protein coding
RefSeq status
MODEL
Organism
Nannospalax galili
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Spalacidae; Spalacinae; Nannospalax
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
6
Annotation release Status Assembly Chr Location
102 current S.galili_v1.0 (GCF_000622305.1) Unplaced Scaffold NW_008331606.1 (4279783..4576878, complement)

NW_008331606.1Genomic Context describing neighboring genes Neighboring gene muscleblind like splicing regulator 3 Neighboring gene U2 spliceosomal RNA Neighboring gene 40S ribosomal protein SA pseudogene Neighboring gene peptidyl-prolyl cis-trans isomerase A pseudogene Neighboring gene ubiquitin specific peptidase 26

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_008331606 Unplaced Scaffold Reference S.galili_v1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Transcriptome sequencing of the blind subterranean mole rat, Spalax galili: utility and potential for the discovery of novel evolutionary patterns. Malik A, et al. PLoS One, 2011. PMID 21857902, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables heparan sulfate 6-O-sulfotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in heparan sulfate proteoglycan biosynthetic process, enzymatic modification IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
heparan-sulfate 6-O-sulfotransferase 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Nannospalax galili Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference S.galili_v1.0 Primary Assembly

Genomic

  1. NW_008331606.1 Reference S.galili_v1.0 Primary Assembly

    Range
    4279783..4576878 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008826747.2 → XP_008824969.1  heparan-sulfate 6-O-sulfotransferase 2 isoform X4

    UniProtKB/TrEMBL
    A0A8C6WAH6
    Related
    ENSNGAP00000019456.1, ENSNGAT00000025118.1
    Conserved Domains (1) summary
    pfam03567
    Location:225 → 490
    Sulfotransfer_2; Sulfotransferase family

  2. XM_008826746.2 → XP_008824968.1  heparan-sulfate 6-O-sulfotransferase 2 isoform X1

    UniProtKB/TrEMBL
    A0A8C6WAA9
    Related
    ENSNGAP00000019454.1, ENSNGAT00000025116.1
    Conserved Domains (1) summary
    pfam03567
    Location:225 → 530
    Sulfotransfer_2; Sulfotransferase family

  3. XM_029560448.1 → XP_029416308.1  heparan-sulfate 6-O-sulfotransferase 2 isoform X2

    Conserved Domains (1) summary
    pfam03567
    Location:225 → 519
    Sulfotransfer_2; Sulfotransferase family

  4. XM_029560449.1 → XP_029416309.1  heparan-sulfate 6-O-sulfotransferase 2 isoform X3

    Conserved Domains (1) summary
    pfam03567
    Location:225 → 501
    Sulfotransfer_2; Sulfotransferase family

  5. XM_029560450.1 → XP_029416310.1  heparan-sulfate 6-O-sulfotransferase 2 isoform X5

    Conserved Domains (1) summary
    pfam03567
    Location:79 → 384
    Sulfotransfer_2; Sulfotransferase family
Nucleotide Protein
Heading Accession and Version

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