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Neb nebulin [ Nannospalax galili (Upper Galilee mountains blind mole rat) ]

Gene ID: 103727308, updated on 11-Mar-2024

Summary

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Gene symbol
Neb
Gene description
nebulin
Gene type
protein coding
RefSeq status
MODEL
Organism
Nannospalax galili
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Spalacidae; Spalacinae; Nannospalax
Annotation information
Annotation category: partial on reference assembly
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
96
Annotation release Status Assembly Chr Location
102 current S.galili_v1.0 (GCF_000622305.1) Unplaced Scaffold NW_008360320.1 (3714..127927)

NW_008360320.1Genomic Context describing neighboring genes Neighboring gene replication timing regulatory factor 1 Neighboring gene DNA damage-binding protein 1-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_008360320 Unplaced Scaffold Reference S.galili_v1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Transcriptome sequencing of the blind subterranean mole rat, Spalax galili: utility and potential for the discovery of novel evolutionary patterns. Malik A, et al. PLoS One, 2011. PMID 21857902, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables actin filament binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cardiac muscle thin filament assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Z disc IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
nebulin

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Nannospalax galili Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference S.galili_v1.0 Primary Assembly

Genomic

  1. NW_008360320.1 Reference S.galili_v1.0 Primary Assembly

    Range
    3714..127927
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008825145.2 → XP_008823367.1  nebulin

    Conserved Domains (4) summary
    smart00227
    Location:954 → 984
    NEBU; The Nebulin repeat is present also in Las1
    PTZ00121
    Location:3236 → 3832
    PTZ00121; MAEBL; Provisional
    cd11933
    Location:4231 → 4288
    SH3_Nebulin_C; C-terminal Src Homology 3 domain of Nebulin
    pfam00880
    Location:1933 → 1959
    Nebulin; Nebulin repeat
Nucleotide Protein
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