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LOC103677672 protocadherin-8 [ Ursus maritimus (polar bear) ]

Gene ID: 103677672, updated on 16-Nov-2023

Summary

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Gene symbol
LOC103677672
Gene description
protocadherin-8
Gene type
protein coding
RefSeq status
MODEL
Organism
Ursus maritimus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Ursidae; Ursus
Also known as
PCDH8
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Genomic context

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See LOC103677672 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
3
Annotation release Status Assembly Chr Location
101 current ASM1731132v1 (GCF_017311325.1) Unplaced Scaffold NW_024423344.1 (29823057..29827456, complement)
100 previous assembly UrsMar_1.0 (GCF_000687225.1) Unplaced Scaffold NW_007907279.1 (13132023..13142349)

NW_024423344.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC121101019 Neighboring gene chondromodulin Neighboring gene uncharacterized LOC103677548 Neighboring gene 40S ribosomal protein S10-like Neighboring gene olfactomedin 4

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in homophilic cell adhesion via plasma membrane adhesion molecules IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protocadherin-8

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Ursus maritimus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1731132v1 Primary Assembly

Genomic

  1. NW_024423344.1 Reference ASM1731132v1 Primary Assembly

    Range
    29823057..29827456 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040620601.1 → XP_040476535.1  protocadherin-8 isoform X2

    UniProtKB/TrEMBL
    A0A8M1F379
    Conserved Domains (1) summary
    cd11304
    Location:501 → 605
    Cadherin_repeat; Cadherin tandem repeat domain

  2. XM_040620597.1 → XP_040476531.1  protocadherin-8 isoform X1

    UniProtKB/TrEMBL
    A0A8M1EZU7
    Conserved Domains (1) summary
    cd11304
    Location:501 → 605
    Cadherin_repeat; Cadherin tandem repeat domain
Nucleotide Protein
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