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PATJ PATJ crumbs cell polarity complex component [ Ursus maritimus (polar bear) ]

Gene ID: 103663073, updated on 11-Mar-2024

Summary

Gene symbol
PATJ
Gene description
PATJ crumbs cell polarity complex component
Gene type
protein coding
RefSeq status
MODEL
Organism
Ursus maritimus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Ursidae; Ursus
Orthologs
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Genomic context

Location:
chromosome: Un
Exon count:
45
Annotation release Status Assembly Chr Location
101 current ASM1731132v1 (GCF_017311325.1) Unplaced Scaffold NW_024423564.1 (53661572..53998467, complement)
100 previous assembly UrsMar_1.0 (GCF_000687225.1) Unplaced Scaffold NW_007907117.1 (25020919..25346310, complement)

NW_024423564.1Genomic Context describing neighboring genes Neighboring gene serine/threonine-protein phosphatase 2A catalytic subunit Neighboring gene LINE1 type transposase domain containing 1 Neighboring gene rRNA-processing protein FCF1 homolog Neighboring gene TM2 domain containing 1

Genomic regions, transcripts, and products

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Ursus maritimus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1731132v1 Primary Assembly

Genomic

  1. NW_024423564.1 Reference ASM1731132v1 Primary Assembly

    Range
    53661572..53998467 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040627217.1XP_040483151.1  inaD-like protein isoform X1

    UniProtKB/TrEMBL
    A0A8M1FIF0
    Conserved Domains (3) summary
    smart00228
    Location:14611546
    PDZ; Domain present in PSD-95, Dlg, and ZO-1/2
    cd00992
    Location:18241908
    PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
    pfam09045
    Location:865
    L27_2
  2. XM_040627218.1XP_040483152.1  inaD-like protein isoform X2

    UniProtKB/TrEMBL
    A0A8M1FM85
    Conserved Domains (3) summary
    smart00228
    Location:14611546
    PDZ; Domain present in PSD-95, Dlg, and ZO-1/2
    cd00992
    Location:17011786
    PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
    pfam09045
    Location:865
    L27_2