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LAMP2 lysosomal associated membrane protein 2 [ Corvus brachyrhynchos (American crow) ]

Gene ID: 103621641, updated on 11-Mar-2024

Summary

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Gene symbol
LAMP2
Gene description
lysosomal associated membrane protein 2
Locus tag
N302_10022
Gene type
protein coding
RefSeq status
MODEL
Organism
Corvus brachyrhynchos
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Passeriformes; Corvoidea; Corvidae; Corvus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
9
Annotation release Status Assembly Chr Location
101 current ASM69197v1 (GCF_000691975.1) Unplaced Scaffold NW_008239780.1 (387982..401028, complement)

NW_008239780.1Genomic Context describing neighboring genes Neighboring gene NFKB activating protein Neighboring gene zinc finger and BTB domain containing 33 Neighboring gene transmembrane protein 255A Neighboring gene ATPase Na+/K+ transporting family member beta 4 Neighboring gene cullin 4B Neighboring gene MCTS1 re-initiation and release factor

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_008239780.1 Unplaced Scaffold Reference ASM69197v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in autophagosome maturation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cellular response to starvation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein targeting to lysosome involved in chaperone-mediated autophagy IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in autophagosome membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
lysosome-associated membrane glycoprotein 2
Names
Lysosome-associated membrane glycoprotein 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Corvus brachyrhynchos Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM69197v1

Genomic

  1. NW_008239780.1 Reference ASM69197v1

    Range
    387982..401028 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017743113.1 → XP_017598602.1  lysosome-associated membrane glycoprotein 2 isoform X1

    UniProtKB/TrEMBL
    A0A091F2A0
    Conserved Domains (1) summary
    pfam01299
    Location:64 → 382
    Lamp; Lysosome-associated membrane glycoprotein (Lamp)

  2. XM_008640479.2 → XP_008638701.1  lysosome-associated membrane glycoprotein 2 isoform X2

    See identical proteins and their annotated locations for XP_008638701.1

    UniProtKB/TrEMBL
    A0A091F2A0
    Conserved Domains (1) summary
    pfam01299
    Location:64 → 381
    Lamp; Lysosome-associated membrane glycoprotein (Lamp)
Nucleotide Protein
Heading Accession and Version

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