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ZBTB16 zinc finger and BTB domain containing 16 [ Corvus brachyrhynchos (American crow) ]

Gene ID: 103618525, updated on 3-Aug-2024

Summary

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Gene symbol
ZBTB16
Gene description
zinc finger and BTB domain containing 16
Locus tag
N302_11183
Gene type
protein coding
RefSeq status
MODEL
Organism
Corvus brachyrhynchos
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Corvoidea; Corvidae; Corvus
Orthologs
human mouse all
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Genomic context

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See ZBTB16 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
6
Annotation release Status Assembly Chr Location
101 current ASM69197v1 (GCF_000691975.1) Unplaced Scaffold NW_008238838.1 (6574224..6627844)

NW_008238838.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC108447710 Neighboring gene RNA exonuclease 2 Neighboring gene nicotinamide N-methyltransferase Neighboring gene 5-hydroxytryptamine receptor 3A Neighboring gene ubiquitin specific peptidase 28

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_008238838.1 Unplaced Scaffold Reference ASM69197v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
zinc finger and BTB domain-containing protein 16
Names
Zinc finger and BTB domain-containing protein 16

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Corvus brachyrhynchos Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM69197v1

Genomic

  1. NW_008238838.1 Reference ASM69197v1

    Range
    6574224..6627844
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008636947.2 → XP_008635169.1  zinc finger and BTB domain-containing protein 16

    See identical proteins and their annotated locations for XP_008635169.1

    UniProtKB/TrEMBL
    A0A091EUY5
    Conserved Domains (7) summary
    smart00225
    Location:35 → 106
    BTB; Broad-Complex, Tramtrack and Bric a brac
    COG5048
    Location:463 → 622
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:520 → 540
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00651
    Location:25 → 106
    BTB; BTB/POZ domain
    pfam12756
    Location:492 → 573
    zf-C2H2_2; C2H2 type zinc-finger (2 copies)
    pfam13465
    Location:561 → 584
    zf-H2C2_2; Zinc-finger double domain
    pfam15229
    Location:174 → 295
    POM121; POM121 family
Nucleotide Protein
Heading Accession and Version

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