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IKZF1 IKAROS family zinc finger 1 [ Galeopterus variegatus (Sunda flying lemur) ]

Gene ID: 103588251, updated on 11-Mar-2024

Summary

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Gene symbol
IKZF1
Gene description
IKAROS family zinc finger 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Galeopterus variegatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Dermoptera; Cynocephalidae; Galeopterus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
8
Annotation release Status Assembly Chr Location
100 current G_variegatus-3.0.2 (GCF_000696425.1) Unplaced Scaffold NW_007726651.1 (360072..453675, complement)

NW_007726651.1Genomic Context describing neighboring genes Neighboring gene dopa decarboxylase Neighboring gene fidgetin like 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_007726651 unplaced scaffold reference G_variegatus-3.0.2 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
DNA-binding protein Ikaros

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Galeopterus variegatus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference G_variegatus-3.0.2 Primary Assembly

Genomic

  1. NW_007726651.1 Reference G_variegatus-3.0.2 Primary Assembly

    Range
    360072..453675 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008569882.1 → XP_008568104.1  DNA-binding protein Ikaros isoform X2

    Conserved Domains (2) summary
    sd00017
    Location:119 → 139
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam13465
    Location:132 → 156
    zf-H2C2_2; Zinc-finger double domain

  2. XM_008569881.1 → XP_008568103.1  DNA-binding protein Ikaros isoform X1

    Conserved Domains (3) summary
    COG5048
    Location:144 → 218
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:119 → 139
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam13465
    Location:132 → 156
    zf-H2C2_2; Zinc-finger double domain

  3. XM_008569894.1 → XP_008568116.1  DNA-binding protein Ikaros isoform X13

  4. XM_008569893.1 → XP_008568115.1  DNA-binding protein Ikaros isoform X12

  5. XM_008569892.1 → XP_008568114.1  DNA-binding protein Ikaros isoform X11

  6. XM_008569890.1 → XP_008568112.1  DNA-binding protein Ikaros isoform X10

    Conserved Domains (1) summary
    sd00017
    Location:60 → 81
    ZF_C2H2; C2H2 Zn finger [structural motif]

  7. XM_008569887.1 → XP_008568109.1  DNA-binding protein Ikaros isoform X7

    Conserved Domains (1) summary
    sd00017
    Location:60 → 81
    ZF_C2H2; C2H2 Zn finger [structural motif]

  8. XM_008569889.1 → XP_008568111.1  DNA-binding protein Ikaros isoform X9

    Conserved Domains (4) summary
    COG5048
    Location:1 → 112
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:60 → 80
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00096
    Location:58 → 80
    zf-C2H2; Zinc finger, C2H2 type
    pfam13465
    Location:72 → 97
    zf-H2C2_2; Zinc-finger double domain

  9. XM_008569886.1 → XP_008568108.1  DNA-binding protein Ikaros isoform X6

    Conserved Domains (4) summary
    COG5048
    Location:1 → 191
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:60 → 80
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00096
    Location:58 → 80
    zf-C2H2; Zinc finger, C2H2 type
    pfam13465
    Location:72 → 97
    zf-H2C2_2; Zinc-finger double domain

  10. XM_008569885.1 → XP_008568107.1  DNA-binding protein Ikaros isoform X5

    Conserved Domains (4) summary
    COG5048
    Location:1 → 131
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:60 → 80
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00096
    Location:58 → 80
    zf-C2H2; Zinc finger, C2H2 type
    pfam13465
    Location:72 → 97
    zf-H2C2_2; Zinc-finger double domain

  11. XM_008569883.1 → XP_008568105.1  DNA-binding protein Ikaros isoform X3

    Conserved Domains (4) summary
    COG5048
    Location:1 → 131
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:60 → 80
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00096
    Location:58 → 80
    zf-C2H2; Zinc finger, C2H2 type
    pfam13465
    Location:72 → 97
    zf-H2C2_2; Zinc-finger double domain

  12. XM_008569888.1 → XP_008568110.1  DNA-binding protein Ikaros isoform X8

  13. XM_008569884.1 → XP_008568106.1  DNA-binding protein Ikaros isoform X4

    Conserved Domains (3) summary
    COG5048
    Location:144 → 199
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:119 → 139
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam13465
    Location:132 → 156
    zf-H2C2_2; Zinc-finger double domain
Nucleotide Protein
Heading Accession and Version

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