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ABI1 abl interactor 1 [ Calypte anna (Anna's hummingbird) ]

Gene ID: 103527517, updated on 3-Aug-2024

Summary

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Gene symbol
ABI1
Gene description
abl interactor 1
Locus tag
N300_06453
See related
EnsemblRapid:ENSCAAG00010008531
Gene type
protein coding
RefSeq status
MODEL
Organism
Calypte anna
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Strisores; Apodiformes; Trochilidae; Calypte
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 2
Exon count:
13
Annotation release Status Assembly Chr Location
101 current bCalAnn1_v1.p (GCF_003957555.1) 2 NC_044245.1 (17089896..17164240)
100 previous assembly ASM69908v1 (GCF_000699085.1) Unplaced Scaffold NW_007619670.1 (4211595..4286340, complement)

Chromosome 2 - NC_044245.1Genomic Context describing neighboring genes Neighboring gene acyl-CoA binding domain containing 5 Neighboring gene uncharacterized LOC115597897 Neighboring gene decaprenyl diphosphate synthase subunit 1 Neighboring gene protein adenylyltransferase SelO

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables SH3 domain binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables cadherin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in intracellular anatomical structure IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in lamellipodium IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
abl interactor 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Calypte anna Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bCalAnn1_v1.p

Genomic

  1. NC_044245.1 Reference bCalAnn1_v1.p

    Range
    17089896..17164240
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008492722.2 → XP_008490944.1  abl interactor 1 isoform X6

    UniProtKB/TrEMBL
    A0A091HY24
    Related
    ENSCAAP00010011781.1, ENSCAAT00010012414.1
    Conserved Domains (3) summary
    cd11971
    Location:394 → 452
    SH3_Abi1; Src homology 3 domain of Abl Interactor 1
    pfam05667
    Location:34 → 132
    DUF812; Protein of unknown function (DUF812)
    pfam07815
    Location:93 → 169
    Abi_HHR; Abl-interactor HHR

  2. XM_008492716.2 → XP_008490938.1  abl interactor 1 isoform X13

    UniProtKB/TrEMBL
    A0A091HY24
    Related
    ENSCAAP00010011763.1, ENSCAAT00010012394.1
    Conserved Domains (3) summary
    cd11971
    Location:450 → 508
    SH3_Abi1; Src homology 3 domain of Abl Interactor 1
    pfam05667
    Location:34 → 132
    DUF812; Protein of unknown function (DUF812)
    pfam07815
    Location:93 → 169
    Abi_HHR; Abl-interactor HHR

  3. XM_008492718.2 → XP_008490940.1  abl interactor 1 isoform X2

    UniProtKB/TrEMBL
    A0A091HY24
    Conserved Domains (3) summary
    cd11971
    Location:423 → 481
    SH3_Abi1; Src homology 3 domain of Abl Interactor 1
    pfam05667
    Location:34 → 132
    DUF812; Protein of unknown function (DUF812)
    pfam07815
    Location:93 → 169
    Abi_HHR; Abl-interactor HHR

  4. XM_030444323.1 → XP_030300183.1  abl interactor 1 isoform X3

    UniProtKB/TrEMBL
    A0A091HY24
    Related
    ENSCAAP00010011770.1, ENSCAAT00010012403.1
    Conserved Domains (3) summary
    cd11971
    Location:421 → 479
    SH3_Abi1; Src homology 3 domain of Abl Interactor 1
    pfam05667
    Location:34 → 132
    DUF812; Protein of unknown function (DUF812)
    pfam07815
    Location:93 → 169
    Abi_HHR; Abl-interactor HHR

  5. XM_030444326.1 → XP_030300186.1  abl interactor 1 isoform X7

    UniProtKB/TrEMBL
    A0A091HY24
    Conserved Domains (3) summary
    cd11971
    Location:391 → 449
    SH3_Abi1; Src homology 3 domain of Abl Interactor 1
    pfam05667
    Location:34 → 132
    DUF812; Protein of unknown function (DUF812)
    pfam07815
    Location:93 → 169
    Abi_HHR; Abl-interactor HHR

  6. XM_030444327.1 → XP_030300187.1  abl interactor 1 isoform X10

    Related
    ENSCAAP00010011788.1, ENSCAAT00010012421.1
    Conserved Domains (3) summary
    cd11971
    Location:362 → 420
    SH3_Abi1; Src homology 3 domain of Abl Interactor 1
    pfam05667
    Location:34 → 132
    DUF812; Protein of unknown function (DUF812)
    pfam07815
    Location:93 → 169
    Abi_HHR; Abl-interactor HHR

  7. XM_008492724.2 → XP_008490946.1  abl interactor 1 isoform X9

    See identical proteins and their annotated locations for XP_008490946.1

    UniProtKB/TrEMBL
    A0A091HY24
    Conserved Domains (2) summary
    cd11971
    Location:364 → 422
    SH3_Abi1; Src homology 3 domain of Abl Interactor 1
    pfam07815
    Location:93 → 156
    Abi_HHR; Abl-interactor HHR

  8. XM_008492726.2 → XP_008490948.1  abl interactor 1 isoform X11

    See identical proteins and their annotated locations for XP_008490948.1

    UniProtKB/TrEMBL
    A0A091HY24
    Related
    ENSCAAP00010011794.1, ENSCAAT00010012427.1
    Conserved Domains (2) summary
    cd11971
    Location:335 → 393
    SH3_Abi1; Src homology 3 domain of Abl Interactor 1
    pfam07815
    Location:93 → 156
    Abi_HHR; Abl-interactor HHR

  9. XM_008492717.2 → XP_008490939.1  abl interactor 1 isoform X1

    UniProtKB/TrEMBL
    A0A091HY24
    Conserved Domains (3) summary
    cd11971
    Location:445 → 503
    SH3_Abi1; Src homology 3 domain of Abl Interactor 1
    pfam05667
    Location:34 → 132
    DUF812; Protein of unknown function (DUF812)
    pfam07815
    Location:93 → 164
    Abi_HHR; Abl-interactor HHR

  10. XM_008492720.2 → XP_008490942.1  abl interactor 1 isoform X4

    UniProtKB/TrEMBL
    A0A091HY24
    Conserved Domains (3) summary
    cd11971
    Location:418 → 476
    SH3_Abi1; Src homology 3 domain of Abl Interactor 1
    pfam05667
    Location:34 → 132
    DUF812; Protein of unknown function (DUF812)
    pfam07815
    Location:93 → 164
    Abi_HHR; Abl-interactor HHR

  11. XM_008492723.2 → XP_008490945.1  abl interactor 1 isoform X8

    UniProtKB/TrEMBL
    A0A091HY24
    Conserved Domains (3) summary
    cd11971
    Location:389 → 447
    SH3_Abi1; Src homology 3 domain of Abl Interactor 1
    pfam05667
    Location:34 → 132
    DUF812; Protein of unknown function (DUF812)
    pfam07815
    Location:93 → 164
    Abi_HHR; Abl-interactor HHR

  12. XM_008492727.2 → XP_008490949.1  abl interactor 1 isoform X12

    See identical proteins and their annotated locations for XP_008490949.1

    UniProtKB/TrEMBL
    A0A091HY24
    Conserved Domains (2) summary
    cd11971
    Location:330 → 388
    SH3_Abi1; Src homology 3 domain of Abl Interactor 1
    pfam07815
    Location:93 → 154
    Abi_HHR; Abl-interactor HHR

  13. XM_030444325.1 → XP_030300185.1  abl interactor 1 isoform X5

    UniProtKB/TrEMBL
    A0A091HY24
    Conserved Domains (2) summary
    cd11971
    Location:414 → 472
    SH3_Abi1; Src homology 3 domain of Abl Interactor 1
    pfam07815
    Location:57 → 133
    Abi_HHR; Abl-interactor HHR
Nucleotide Protein
Heading Accession and Version

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