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psph phosphoserine phosphatase [ Poecilia reticulata (guppy) ]

Gene ID: 103474559, updated on 11-Mar-2024

Summary

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Gene symbol
psph
Gene description
phosphoserine phosphatase
See related
Ensembl:ENSPREG00000022101
Gene type
protein coding
RefSeq status
MODEL
Organism
Poecilia reticulata
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Poeciliidae; Poeciliinae; Poecilia
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: LG13
Exon count:
8
Annotation release Status Assembly LG Location
101 current Guppy_female_1.0+MT (GCF_000633615.1) LG13 NC_024343.1 (15184858..15190860, complement)

Linkage Group LG13 - NC_024343.1Genomic Context describing neighboring genes Neighboring gene LIM domain kinase 1a Neighboring gene elastin a Neighboring gene nipsnap homolog 2 Neighboring gene uncharacterized LOC103474558 Neighboring gene phosphorylase kinase catalytic subunit gamma 1 Neighboring gene coiled-coil-helix-coiled-coil-helix domain containing 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_024343.1 Chromosome LG13 Reference Guppy_female_1.0+MT Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables L-phosphoserine phosphatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables magnesium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in L-serine biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in dephosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
phosphoserine phosphatase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Poecilia reticulata Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Guppy_female_1.0+MT Primary Assembly

Genomic

  1. NC_024343.1 Reference Guppy_female_1.0+MT Primary Assembly

    Range
    15184858..15190860 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008425629.2 → XP_008423851.1  phosphoserine phosphatase

    See identical proteins and their annotated locations for XP_008423851.1

    UniProtKB/TrEMBL
    A0A3P9QEY3
    Related
    ENSPREP00000032619.1, ENSPRET00000032989.1
    Conserved Domains (2) summary
    PLN02954
    Location:27 → 242
    PLN02954; phosphoserine phosphatase
    pfam00702
    Location:33 → 204
    Hydrolase; haloacid dehalogenase-like hydrolase

  2. XM_008425628.2 → XP_008423850.1  phosphoserine phosphatase

    See identical proteins and their annotated locations for XP_008423850.1

    UniProtKB/TrEMBL
    A0A3P9QEY3
    Conserved Domains (2) summary
    PLN02954
    Location:27 → 242
    PLN02954; phosphoserine phosphatase
    pfam00702
    Location:33 → 204
    Hydrolase; haloacid dehalogenase-like hydrolase
Nucleotide Protein
Heading Accession and Version

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