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tctn1 tectonic family member 1 [ Poecilia reticulata (guppy) ]

Gene ID: 103470982, updated on 11-Mar-2024

Summary

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Gene symbol
tctn1
Gene description
tectonic family member 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Poecilia reticulata
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Poeciliidae; Poeciliinae; Poecilia
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: LG10
Exon count:
14
Annotation release Status Assembly LG Location
101 current Guppy_female_1.0+MT (GCF_000633615.1) LG10 NC_024340.1 (5614317..5636651, complement)

Linkage Group LG10 - NC_024340.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC103470981 Neighboring gene cilia and flagella associated protein 96 Neighboring gene hydrogen voltage-gated channel 1 Neighboring gene uncharacterized LOC108166604 Neighboring gene NK1 transcription factor related 2-like,b

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_024340.1 Chromosome LG10 Reference Guppy_female_1.0+MT Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in cilium assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein localization to ciliary transition zone IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of MKS complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
tectonic-1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Poecilia reticulata Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Guppy_female_1.0+MT Primary Assembly

Genomic

  1. NC_024340.1 Reference Guppy_female_1.0+MT Primary Assembly

    Range
    5614317..5636651 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008419728.2 → XP_008417950.1  tectonic-1 isoform X5

    UniProtKB/TrEMBL
    A0A3P9QGZ1
    Conserved Domains (1) summary
    pfam07773
    Location:88 → 407
    DUF1619; Protein of unknown function (DUF1619)

  2. XM_017307270.1 → XP_017162759.1  tectonic-1 isoform X3

  3. XM_008419726.2 → XP_008417948.1  tectonic-1 isoform X1

    Conserved Domains (1) summary
    pfam07773
    Location:88 → 409
    DUF1619; Protein of unknown function (DUF1619)

  4. XM_008419727.2 → XP_008417949.1  tectonic-1 isoform X2

    Conserved Domains (1) summary
    pfam07773
    Location:88 → 407
    DUF1619; Protein of unknown function (DUF1619)

  5. XM_017307271.1 → XP_017162760.1  tectonic-1 isoform X4

    UniProtKB/TrEMBL
    A0A3P9QGZ1
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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