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abcd2 ATP binding cassette subfamily D member 2 [ Poecilia reticulata (guppy) ]

Gene ID: 103459537, updated on 11-Apr-2024

Summary

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Gene symbol
abcd2
Gene description
ATP binding cassette subfamily D member 2
See related
Ensembl:ENSPREG00000007569
Gene type
protein coding
RefSeq status
MODEL
Organism
Poecilia reticulata
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Poeciliidae; Poeciliinae; Poecilia
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Genomic context

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Location:
chromosome: LG23
Exon count:
10
Annotation release Status Assembly LG Location
101 current Guppy_female_1.0+MT (GCF_000633615.1) LG23 NC_024353.1 (8245335..8258702)

Linkage Group LG23 - NC_024353.1Genomic Context describing neighboring genes Neighboring gene proton myo-inositol cotransporter-like Neighboring gene chromosome LG23 open reading frame, human C12orf40 Neighboring gene kinesin-like protein KIF21A Neighboring gene copine-8

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_024353.1 Chromosome LG23 Reference Guppy_female_1.0+MT Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ABC-type transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP hydrolysis activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables long-chain fatty acid transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in fatty acid beta-oxidation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in long-chain fatty acid import into peroxisome IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in peroxisome organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in very long-chain fatty acid catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in peroxisomal membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ATP-binding cassette sub-family D member 2
Names
ATP-binding cassette, sub-family D (ALD), member 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Poecilia reticulata Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Guppy_female_1.0+MT Primary Assembly

Genomic

  1. NC_024353.1 Reference Guppy_female_1.0+MT Primary Assembly

    Range
    8245335..8258702
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008401179.2 → XP_008399401.1  ATP-binding cassette sub-family D member 2

    UniProtKB/TrEMBL
    A0A3P9NNJ0
    Related
    ENSPREP00000011112.1, ENSPRET00000011239.1
    Conserved Domains (3) summary
    cd03223
    Location:480 → 685
    ABCD_peroxisomal_ALDP; ATP-binding cassette domain of peroxisomal transporter, subfamily D
    TIGR00954
    Location:13 → 687
    3a01203; Peroxysomal Fatty Acyl CoA Transporter (FAT) Family protein
    pfam06472
    Location:82 → 367
    ABC_membrane_2; ABC transporter transmembrane region 2
Nucleotide Protein
Heading Accession and Version

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