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josd1 Josephin domain containing 1 [ Cynoglossus semilaevis (tongue sole) ]

Gene ID: 103382141, updated on 11-Mar-2024

Summary

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Gene symbol
josd1
Gene description
Josephin domain containing 1
See related
Ensembl:ENSCSEG00000020444
Gene type
protein coding
RefSeq status
MODEL
Organism
Cynoglossus semilaevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Carangaria; Pleuronectiformes; Pleuronectoidei; Cynoglossidae; Cynoglossinae; Cynoglossus
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: 8
Exon count:
5
Annotation release Status Assembly Chr Location
102 current Cse_v1.0 (GCF_000523025.1) 8 NC_024314.1 (12254488..12263186)

Chromosome 8 - NC_024314.1Genomic Context describing neighboring genes Neighboring gene immune-associated nucleotide-binding protein 5-like Neighboring gene X-ray repair complementing defective repair in Chinese hamster cells 6 Neighboring gene chromobox homolog 7b Neighboring gene E1A binding protein p300 a Neighboring gene L3MBTL histone methyl-lysine binding protein 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_024314.1 Chromosome 8 Reference Cse_v1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cysteine-type deubiquitinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein deubiquitination IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
josephin-1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cynoglossus semilaevis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Cse_v1.0 Primary Assembly

Genomic

  1. NC_024314.1 Reference Cse_v1.0 Primary Assembly

    Range
    12254488..12263186
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008314822.3 → XP_008313044.1  josephin-1

    UniProtKB/TrEMBL
    A0A3P8WWW8, A0A3P8WZ66
    Related
    ENSCSEP00000031883.1, ENSCSET00000032294.1
    Conserved Domains (1) summary
    pfam02099
    Location:91 → 243
    Josephin; Josephin

  2. XM_017034803.2 → XP_016890292.1  josephin-1

    UniProtKB/TrEMBL
    A0A3P8WWW8, A0A3P8WZ66
    Related
    ENSCSEP00000031872.1, ENSCSET00000032283.1
    Conserved Domains (1) summary
    pfam02099
    Location:91 → 243
    Josephin; Josephin

RNA

  1. XR_521880.3 RNA Sequence

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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