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fads2 fatty acid desaturase 2 [ Cynoglossus semilaevis (tongue sole) ]

Gene ID: 103380276, updated on 11-Mar-2024

Summary

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Gene symbol
fads2
Gene description
fatty acid desaturase 2
Gene type
protein coding
RefSeq status
MODEL
Organism
Cynoglossus semilaevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Carangaria; Pleuronectiformes; Pleuronectoidei; Cynoglossidae; Cynoglossinae; Cynoglossus
Orthologs
human zebrafish all
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Genomic context

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See fads2 in Genome Data Viewer
Location:
chromosome: 6
Exon count:
13
Annotation release Status Assembly Chr Location
102 current Cse_v1.0 (GCF_000523025.1) 6 NC_024312.1 (12981162..12986449, complement)

Chromosome 6 - NC_024312.1Genomic Context describing neighboring genes Neighboring gene myelin regulatory factor Neighboring gene EPS8 signaling adaptor L2 Neighboring gene leucine rich repeat containing 10B Neighboring gene stabilizer of axonemal microtubules 4

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_024312.1 Chromosome 6 Reference Cse_v1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in lipid metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LOW QUALITY PROTEIN: fatty acid desaturase 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cynoglossus semilaevis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Cse_v1.0 Primary Assembly

Genomic

  1. NC_024312.1 Reference Cse_v1.0 Primary Assembly

    Range
    12981162..12986449 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008312161.3 → XP_008310383.1  LOW QUALITY PROTEIN: fatty acid desaturase 2

    Conserved Domains (3) summary
    cd03506
    Location:169 → 417
    Delta6-FADS-like; The Delta6 Fatty Acid Desaturase (Delta6-FADS)-like CD includes the integral-membrane enzymes: delta-4, delta-5, delta-6, delta-8, delta-8-sphingolipid, and delta-11 desaturases found in vertebrates, higher plants, fungi, and bacteria. These desaturases ...
    pfam00173
    Location:43 → 101
    Cyt-b5; Cytochrome b5-like Heme/Steroid binding domain
    pfam00487
    Location:165 → 421
    FA_desaturase; Fatty acid desaturase
Nucleotide Protein
Heading Accession and Version

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