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sub1 SUB1 regulator of transcription [ Stegastes partitus (bicolor damselfish) ]

Gene ID: 103372568, updated on 22-Oct-2023

Summary

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Gene symbol
sub1
Gene description
SUB1 regulator of transcription
See related
Ensembl:ENSSPAG00000019363
Gene type
protein coding
RefSeq status
MODEL
Organism
Stegastes partitus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Pomacentridae; Stegastes
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Genomic context

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See sub1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
5
Annotation release Status Assembly Chr Location
100 current Stegastes_partitus-1.0.2 (GCF_000690725.1) Unplaced Scaffold NW_007579512.1 (112457..120236)

NW_007579512.1Genomic Context describing neighboring genes Neighboring gene zinc finger RNA binding protein Neighboring gene UPF0723 protein C11orf83 homolog

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_007579512 unplaced scaffold reference Stegastes_partitus-1.0.2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transcription coactivator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in positive regulation of transcription initiation by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of transcription regulator complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
activated RNA polymerase II transcriptional coactivator p15
Names
SUB1 homolog, transcriptional regulator

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Stegastes partitus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Stegastes_partitus-1.0.2

Genomic

  1. NW_007579512.1 Reference Stegastes_partitus-1.0.2

    Range
    112457..120236
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008302240.1 → XP_008300462.1  activated RNA polymerase II transcriptional coactivator p15

    UniProtKB/TrEMBL
    A0A3B5BGM3
    Related
    ENSSPAP00000025622.1, ENSSPAT00000026043.1
    Conserved Domains (1) summary
    pfam02229
    Location:66 → 113
    PC4; Transcriptional Coactivator p15 (PC4)
Nucleotide Protein
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