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camk2a calcium/calmodulin dependent protein kinase II alpha [ Stegastes partitus (bicolor damselfish) ]

Gene ID: 103372380, updated on 31-Jan-2024

Summary

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Gene symbol
camk2a
Gene description
calcium/calmodulin dependent protein kinase II alpha
Gene type
protein coding
RefSeq status
MODEL
Organism
Stegastes partitus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Pomacentridae; Stegastes
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Genomic context

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Location:
chromosome: Un
Exon count:
20
Annotation release Status Assembly Chr Location
100 current Stegastes_partitus-1.0.2 (GCF_000690725.1) Unplaced Scaffold NW_007579475.1 (65113..107303, complement)

NW_007579475.1Genomic Context describing neighboring genes Neighboring gene dachshund homolog 2-like Neighboring gene CHM Rab escort protein Neighboring gene ribosomal protein S14 Neighboring gene GTPase IMAP family member 4-like Neighboring gene steroid receptor RNA activator 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_007579475 unplaced scaffold reference Stegastes_partitus-1.0.2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables calmodulin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables calmodulin-dependent protein kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein phosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in neuron projection IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
calcium/calmodulin-dependent protein kinase type II subunit alpha

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Stegastes partitus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Stegastes_partitus-1.0.2

Genomic

  1. NW_007579475.1 Reference Stegastes_partitus-1.0.2

    Range
    65113..107303 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008301996.1 → XP_008300218.1  calcium/calmodulin-dependent protein kinase type II subunit alpha

    UniProtKB/TrEMBL
    A0A9Y4TV57
    Conserved Domains (3) summary
    smart00220
    Location:36 → 275
    S_TKc; Serine/Threonine protein kinases, catalytic domain
    cd14086
    Location:36 → 306
    STKc_CaMKII; Catalytic domain of the Serine/Threonine kinase, Calcium/calmodulin-dependent protein kinase Type II
    cl02808
    Location:438 → 618
    RT_like; RT_like: Reverse transcriptase (RT, RNA-dependent DNA polymerase)_like family. An RT gene is usually indicative of a mobile element such as a retrotransposon or retrovirus. RTs occur in a variety of mobile elements, including retrotransposons, ...
Nucleotide Protein
Heading Accession and Version

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