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dync2li1 dynein, cytoplasmic 2, light intermediate chain 1 [ Stegastes partitus (bicolor damselfish) ]

Gene ID: 103365804, updated on 11-Mar-2024

Summary

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Gene symbol
dync2li1
Gene description
dynein, cytoplasmic 2, light intermediate chain 1
See related
Ensembl:ENSSPAG00000014024
Gene type
protein coding
RefSeq status
MODEL
Organism
Stegastes partitus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Pomacentridae; Stegastes
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: Un
Exon count:
13
Annotation release Status Assembly Chr Location
100 current Stegastes_partitus-1.0.2 (GCF_000690725.1) Unplaced Scaffold NW_007578607.1 (284404..291851)

NW_007578607.1Genomic Context describing neighboring genes Neighboring gene centrosomal protein 170Aa Neighboring gene LYR motif containing 7 Neighboring gene histidine triad nucleotide binding protein 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_007578607 unplaced scaffold reference Stegastes_partitus-1.0.2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables dynein heavy chain binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in intraciliary retrograde transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in intraciliary transport involved in cilium assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in axoneme IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in ciliary basal body IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of cytoplasmic dynein complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cytoplasmic dynein 2 light intermediate chain 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Stegastes partitus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Stegastes_partitus-1.0.2

Genomic

  1. NW_007578607.1 Reference Stegastes_partitus-1.0.2

    Range
    284404..291851
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008293351.1 → XP_008291573.1  cytoplasmic dynein 2 light intermediate chain 1

    UniProtKB/TrEMBL
    A0A3B5AYK8, A0A9Y4KDZ6
    Related
    ENSSPAP00000018597.1, ENSSPAT00000018877.1
    Conserved Domains (1) summary
    cl21455
    Location:38 → 242
    P-loop_NTPase; P-loop containing Nucleoside Triphosphate Hydrolases
Nucleotide Protein
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