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gsdmeb gasdermin Eb [ Stegastes partitus (bicolor damselfish) ]

Gene ID: 103364056, updated on 11-Mar-2024

Summary

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Gene symbol
gsdmeb
Gene description
gasdermin Eb
Gene type
protein coding
RefSeq status
MODEL
Organism
Stegastes partitus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Pomacentridae; Stegastes
Also known as
dfna5; gsdme
Orthologs
zebrafish all
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Genomic context

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Location:
chromosome: Un
Exon count:
10
Annotation release Status Assembly Chr Location
100 current Stegastes_partitus-1.0.2 (GCF_000690725.1) Unplaced Scaffold NW_007578442.1 (19434..34922, complement)

NW_007578442.1Genomic Context describing neighboring genes Neighboring gene protein associated with LIN7 2, MAGUK p55 family member a Neighboring gene oxysterol binding protein-like 3b Neighboring gene chromosome unknown open reading frame, human C7orf31

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_007578442 unplaced scaffold reference Stegastes_partitus-1.0.2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in programmed cell death IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
non-syndromic hearing impairment protein 5
Names
DFNA5, deafness associated tumor suppressor
gasdermin E

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Stegastes partitus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Stegastes_partitus-1.0.2

Genomic

  1. NW_007578442.1 Reference Stegastes_partitus-1.0.2

    Range
    19434..34922 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008291061.1 → XP_008289283.1  non-syndromic hearing impairment protein 5

    UniProtKB/TrEMBL
    A0A9Y4KEE8
    Conserved Domains (1) summary
    pfam04598
    Location:1 → 398
    Gasdermin; Gasdermin family
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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