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usp7 ubiquitin specific peptidase 7 (herpes virus-associated) [ Stegastes partitus (bicolor damselfish) ]

Gene ID: 103362393, updated on 11-Mar-2024

Summary

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Gene symbol
usp7
Gene description
ubiquitin specific peptidase 7 (herpes virus-associated)
See related
Ensembl:ENSSPAG00000012979
Gene type
protein coding
RefSeq status
MODEL
Organism
Stegastes partitus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Pomacentridae; Stegastes
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: Un
Exon count:
31
Annotation release Status Assembly Chr Location
100 current Stegastes_partitus-1.0.2 (GCF_000690725.1) Unplaced Scaffold NW_007578303.1 (201425..228622, complement)

NW_007578303.1Genomic Context describing neighboring genes Neighboring gene solute carrier family 2 member 6 Neighboring gene LITAF domain containing Neighboring gene HUWE1 associated protein modifying stress responses a Neighboring gene dynactin 5

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_007578303 unplaced scaffold reference Stegastes_partitus-1.0.2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cysteine-type deubiquitinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables cysteine-type endopeptidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein deubiquitination IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of protein stability IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ubiquitin carboxyl-terminal hydrolase 7

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Stegastes partitus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Stegastes_partitus-1.0.2

Genomic

  1. NW_007578303.1 Reference Stegastes_partitus-1.0.2

    Range
    201425..228622 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008288730.1 → XP_008286952.1  ubiquitin carboxyl-terminal hydrolase 7 isoform X3

    UniProtKB/TrEMBL
    A0A9Y4K7X3
    Conserved Domains (1) summary
    cl02553
    Location:25 → 1103
    Peptidase_C19; Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyse bonds involving the carboxyl group of the C-terminal Gly ...

  2. XM_008288729.1 → XP_008286951.1  ubiquitin carboxyl-terminal hydrolase 7 isoform X2

    UniProtKB/TrEMBL
    A0A3B5AHA2
    Related
    ENSSPAP00000017264.1, ENSSPAT00000017531.1
    Conserved Domains (1) summary
    cl02553
    Location:25 → 1110
    Peptidase_C19; Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyse bonds involving the carboxyl group of the C-terminal Gly ...

  3. XM_008288728.1 → XP_008286950.1  ubiquitin carboxyl-terminal hydrolase 7 isoform X1

    UniProtKB/TrEMBL
    A0A9Y4N7W6
    Conserved Domains (1) summary
    cl02553
    Location:25 → 1108
    Peptidase_C19; Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyse bonds involving the carboxyl group of the C-terminal Gly ...
Nucleotide Protein
Heading Accession and Version

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