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jph2 junctophilin 2 [ Stegastes partitus (bicolor damselfish) ]

Gene ID: 103361842, updated on 11-Mar-2024

Summary

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Gene symbol
jph2
Gene description
junctophilin 2
See related
Ensembl:ENSSPAG00000002904
Gene type
protein coding
RefSeq status
MODEL
Organism
Stegastes partitus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Pomacentridae; Stegastes
Orthologs
zebrafish all
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Genomic context

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See jph2 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
6
Annotation release Status Assembly Chr Location
100 current Stegastes_partitus-1.0.2 (GCF_000690725.1) Unplaced Scaffold NW_007577743.1 (833376..864507)

NW_007577743.1Genomic Context describing neighboring genes Neighboring gene fat storage inducing transmembrane protein 2 Neighboring gene ganglioside induced differentiation associated protein 1-like 1 Neighboring gene sorting nexin family member 21 Neighboring gene peptidase inhibitor 16

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_007577743 unplaced scaffold reference Stegastes_partitus-1.0.2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of junctional membrane complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in sarcoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
junctophilin-2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Stegastes partitus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Stegastes_partitus-1.0.2

Genomic

  1. NW_007577743.1 Reference Stegastes_partitus-1.0.2

    Range
    833376..864507
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008288044.1 → XP_008286266.1  junctophilin-2

    UniProtKB/TrEMBL
    A0A3B4ZPU1
    Related
    ENSSPAP00000003752.1, ENSSPAT00000003830.1
    Conserved Domains (3) summary
    smart00698
    Location:322 → 341
    MORN; Possible plasma membrane-binding motif in junctophilins, PIP-5-kinases and protein kinases
    pfam02493
    Location:106 → 128
    MORN; MORN repeat
    pfam11035
    Location:533 → 670
    SnAPC_2_like; Small nuclear RNA activating complex subunit 2, SNAP190 Myb
Nucleotide Protein
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Gene LinkOut

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