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reps1 RALBP1 associated Eps domain containing 1 [ Stegastes partitus (bicolor damselfish) ]

Gene ID: 103359591, updated on 11-Mar-2024

Summary

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Gene symbol
reps1
Gene description
RALBP1 associated Eps domain containing 1
See related
Ensembl:ENSSPAG00000016039
Gene type
protein coding
RefSeq status
MODEL
Organism
Stegastes partitus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Pomacentridae; Stegastes
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: Un
Exon count:
15
Annotation release Status Assembly Chr Location
100 current Stegastes_partitus-1.0.2 (GCF_000690725.1) Unplaced Scaffold NW_007577740.1 (1983079..1997161, complement)

NW_007577740.1Genomic Context describing neighboring genes Neighboring gene scavenger receptor class A, member 3 Neighboring gene clusterin

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_007577740 unplaced scaffold reference Stegastes_partitus-1.0.2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in endocytosis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in endosomal transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ralBP1-associated Eps domain-containing protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Stegastes partitus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Stegastes_partitus-1.0.2

Genomic

  1. NW_007577740.1 Reference Stegastes_partitus-1.0.2

    Range
    1983079..1997161 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008285004.1 → XP_008283226.1  ralBP1-associated Eps domain-containing protein 1 isoform X2

    UniProtKB/TrEMBL
    A0A3B5ALP9, A0A9Y4MV86
    Conserved Domains (3) summary
    smart00027
    Location:84 → 175
    EH; Eps15 homology domain
    cd00052
    Location:95 → 161
    EH; Eps15 homology domain; found in proteins implicated in endocytosis, vesicle transport, and signal transduction. The alignment contains a pair of EF-hand motifs, typically one of them is canonical and binds to Ca2+, while the other may not bind to Ca2+. A ...
    cl01853
    Location:527 → 574
    YabA; Regulator of replication initiation timing [Replication, recombination and repair]

  2. XM_008284995.1 → XP_008283217.1  ralBP1-associated Eps domain-containing protein 1 isoform X1

    UniProtKB/TrEMBL
    A0A3B5ALP9, A0A9Y4K0V5
    Related
    ENSSPAP00000021356.1, ENSSPAT00000021681.1
    Conserved Domains (3) summary
    smart00027
    Location:84 → 175
    EH; Eps15 homology domain
    cd00052
    Location:95 → 161
    EH; Eps15 homology domain; found in proteins implicated in endocytosis, vesicle transport, and signal transduction. The alignment contains a pair of EF-hand motifs, typically one of them is canonical and binds to Ca2+, while the other may not bind to Ca2+. A ...
    cl01853
    Location:554 → 601
    YabA; Regulator of replication initiation timing [Replication, recombination and repair]
Nucleotide Protein
Heading Accession and Version

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