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ppat phosphoribosyl pyrophosphate amidotransferase [ Stegastes partitus (bicolor damselfish) ]

Gene ID: 103357422, updated on 11-Mar-2024

Summary

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Gene symbol
ppat
Gene description
phosphoribosyl pyrophosphate amidotransferase
See related
Ensembl:ENSSPAG00000016154
Gene type
protein coding
RefSeq status
MODEL
Organism
Stegastes partitus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Pomacentridae; Stegastes
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: Un
Exon count:
11
Annotation release Status Assembly Chr Location
100 current Stegastes_partitus-1.0.2 (GCF_000690725.1) Unplaced Scaffold NW_007577984.1 (534938..546425)

NW_007577984.1Genomic Context describing neighboring genes Neighboring gene GTP-binding protein REM 2-like Neighboring gene neural retina leucine zipper Neighboring gene phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoimidazole succinocarboxamide synthetase Neighboring gene uncharacterized LOC103357431 Neighboring gene aminoadipate-semialdehyde dehydrogenase Neighboring gene capping protein inhibiting regulator of actin dynamics

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_007577984 unplaced scaffold reference Stegastes_partitus-1.0.2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables amidophosphoribosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in purine nucleobase biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in purine nucleotide biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
amidophosphoribosyltransferase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Stegastes partitus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Stegastes_partitus-1.0.2

Genomic

  1. NW_007577984.1 Reference Stegastes_partitus-1.0.2

    Range
    534938..546425
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008281979.1 → XP_008280201.1  amidophosphoribosyltransferase

    UniProtKB/TrEMBL
    A0A3B5ALW3
    Related
    ENSSPAP00000021421.1, ENSSPAT00000021753.1
    Conserved Domains (3) summary
    cd06223
    Location:306 → 442
    PRTases_typeI; Phosphoribosyl transferase (PRT)-type I domain
    COG0034
    Location:10 → 507
    PurF; Glutamine phosphoribosylpyrophosphate amidotransferase [Nucleotide transport and metabolism]
    cd00715
    Location:12 → 295
    GPATase_N; Glutamine amidotransferases class-II (GN-AT)_GPAT- type. This domain is found at the N-terminus of glutamine phosphoribosylpyrophosphate (Prpp) amidotransferase (GPATase) . The glutaminase domain catalyzes amide nitrogen transfer from glutamine to the ...
Nucleotide Protein
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