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pycr3 pyrroline-5-carboxylate reductase 3 [ Stegastes partitus (bicolor damselfish) ]

Gene ID: 103354731, updated on 11-Mar-2024

Summary

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Gene symbol
pycr3
Gene description
pyrroline-5-carboxylate reductase 3
See related
Ensembl:ENSSPAG00000016938
Gene type
protein coding
RefSeq status
MODEL
Organism
Stegastes partitus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Pomacentridae; Stegastes
Also known as
pycrl
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: Un
Exon count:
8
Annotation release Status Assembly Chr Location
100 current Stegastes_partitus-1.0.2 (GCF_000690725.1) Unplaced Scaffold NW_007577849.1 (717584..728854)

NW_007577849.1Genomic Context describing neighboring genes Neighboring gene tissue specific transplantation antigen P35B Neighboring gene brambleberry Neighboring gene elongation factor 1-delta-like Neighboring gene uncharacterized LOC103354737 Neighboring gene tripartite motif-containing protein 65-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_007577849 unplaced scaffold reference Stegastes_partitus-1.0.2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables pyrroline-5-carboxylate reductase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in L-proline biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
pyrroline-5-carboxylate reductase 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Stegastes partitus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Stegastes_partitus-1.0.2

Genomic

  1. NW_007577849.1 Reference Stegastes_partitus-1.0.2

    Range
    717584..728854
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008278206.1 → XP_008276428.1  pyrroline-5-carboxylate reductase 3 isoform X3

    UniProtKB/TrEMBL
    A0A3B5ALZ6, A0A9Y4JPC4
    Related
    ENSSPAP00000022508.1, ENSSPAT00000022868.1
    Conserved Domains (3) summary
    PLN02688
    Location:9 → 272
    PLN02688; pyrroline-5-carboxylate reductase
    pfam03807
    Location:12 → 103
    F420_oxidored; NADP oxidoreductase coenzyme F420-dependent
    pfam14748
    Location:165 → 269
    P5CR_dimer; Pyrroline-5-carboxylate reductase dimerization

  2. XM_008278204.1 → XP_008276426.1  pyrroline-5-carboxylate reductase 3 isoform X1

    UniProtKB/TrEMBL
    A0A9Y4JT33
    Conserved Domains (4) summary
    PLN02688
    Location:160 → 423
    PLN02688; pyrroline-5-carboxylate reductase
    pfam03807
    Location:163 → 254
    F420_oxidored; NADP oxidoreductase coenzyme F420-dependent
    pfam13837
    Location:10 → 78
    Myb_DNA-bind_4; Myb/SANT-like DNA-binding domain
    pfam14748
    Location:316 → 420
    P5CR_dimer; Pyrroline-5-carboxylate reductase dimerization

  3. XM_008278205.1 → XP_008276427.1  pyrroline-5-carboxylate reductase 3 isoform X2

    UniProtKB/TrEMBL
    A0A9Y4JSD5
    Conserved Domains (4) summary
    PLN02688
    Location:160 → 363
    PLN02688; pyrroline-5-carboxylate reductase
    pfam13837
    Location:10 → 78
    Myb_DNA-bind_4; Myb/SANT-like DNA-binding domain
    pfam14748
    Location:256 → 360
    P5CR_dimer; Pyrroline-5-carboxylate reductase dimerization
    cl21454
    Location:163 → 228
    NADB_Rossmann; Rossmann-fold NAD(P)(+)-binding proteins
Nucleotide Protein
Heading Accession and Version

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