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lrpap1 low density lipoprotein receptor-related protein associated protein 1 [ Stegastes partitus (bicolor damselfish) ]

Gene ID: 103354518, updated on 11-Mar-2024

Summary

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Gene symbol
lrpap1
Gene description
low density lipoprotein receptor-related protein associated protein 1
See related
Ensembl:ENSSPAG00000007439
Gene type
protein coding
RefSeq status
MODEL
Organism
Stegastes partitus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Pomacentridae; Stegastes
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: Un
Exon count:
8
Annotation release Status Assembly Chr Location
100 current Stegastes_partitus-1.0.2 (GCF_000690725.1) Unplaced Scaffold NW_007577841.1 (327638..341741, complement)

NW_007577841.1Genomic Context describing neighboring genes Neighboring gene huntingtin Neighboring gene regulator of G protein signaling 12b Neighboring gene protein Dok-7-like Neighboring gene adrenoceptor alpha 2C Neighboring gene H6 family homeobox 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_007577841 unplaced scaffold reference Stegastes_partitus-1.0.2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables heparin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables lipase binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables low-density lipoprotein particle receptor binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables receptor antagonist activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables very-low-density lipoprotein particle receptor binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in negative regulation of receptor internalization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of very-low-density lipoprotein particle clearance IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cis-Golgi network IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endomembrane system IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum-Golgi intermediate compartment IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in rough endoplasmic reticulum lumen IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
alpha-2-macroglobulin receptor-associated protein
Names
LDL receptor related protein associated protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Stegastes partitus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Stegastes_partitus-1.0.2

Genomic

  1. NW_007577841.1 Reference Stegastes_partitus-1.0.2

    Range
    327638..341741 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008277924.1 → XP_008276146.1  alpha-2-macroglobulin receptor-associated protein

    UniProtKB/TrEMBL
    A0A3B5A7Y8
    Related
    ENSSPAP00000009752.1, ENSSPAT00000009927.1
    Conserved Domains (5) summary
    cd14806
    Location:44 → 53
    RAP_D1; 3-helical coiled coil [structural motif]
    cd14807
    Location:135 → 231
    RAP_D2; Domain 2 of receptor-associated protein (RAP)
    cd14808
    Location:240 → 347
    RAP_D3; C-terminal receptor-associated protein (RAP), Domain 3
    pfam06400
    Location:5 → 117
    Alpha-2-MRAP_N; Alpha-2-macroglobulin RAP, N-terminal domain
    pfam06401
    Location:135 → 347
    Alpha-2-MRAP_C; Alpha-2-macroglobulin RAP, C-terminal domain
Nucleotide Protein
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