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MKRN3 makorin ring finger protein 3 [ Carlito syrichta (Philippine tarsier) ]

Gene ID: 103255306, updated on 11-Mar-2024

Summary

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Gene symbol
MKRN3
Gene description
makorin ring finger protein 3
Gene type
protein coding
RefSeq status
MODEL
Organism
Carlito syrichta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Tarsiiformes; Tarsiidae; Carlito
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
1
Annotation release Status Assembly Chr Location
101 current Tarsius_syrichta-2.0.1 (GCF_000164805.1) Unplaced Scaffold NW_007232113.1 (42285..44165)

NW_007232113.1Genomic Context describing neighboring genes Neighboring gene MAGE family member L2 Neighboring gene necdin

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_007232113 Unplaced Scaffold Reference Tarsius_syrichta-2.0.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ubiquitin protein ligase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein polyubiquitination IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
probable E3 ubiquitin-protein ligase makorin-3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Carlito syrichta Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Tarsius_syrichta-2.0.1 Primary Assembly

Genomic

  1. NW_007232113.1 Reference Tarsius_syrichta-2.0.1 Primary Assembly

    Range
    42285..44165
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008053271.1 → XP_008051462.1  probable E3 ubiquitin-protein ligase makorin-3

    UniProtKB/TrEMBL
    A0A1U7TER7
    Conserved Domains (4) summary
    smart00356
    Location:95 → 121
    ZnF_C3H1; zinc finger
    PHA03096
    Location:252 → 401
    PHA03096; p28-like protein; Provisional
    cd00162
    Location:312 → 366
    RING; RING-finger (Really Interesting New Gene) domain, a specialized type of Zn-finger of 40 to 60 residues that binds two atoms of zinc; defined by the 'cross-brace' motif C-X2-C-X(9-39)-C-X(1-3)- H-X(2-3)-(N/C/H)-X2-C-X(4-48)C-X2-C; probably involved in ...
    pfam15815
    Location:441 → 507
    MKRN1_C; E3 ubiquitin-protein ligase makorin-1, C-terminal
Nucleotide Protein
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