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BAZ1B bromodomain adjacent to zinc finger domain 1B [ Chlorocebus sabaeus (green monkey) ]

Gene ID: 103246637, updated on 11-Mar-2024

Summary

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Gene symbol
BAZ1B
Gene description
bromodomain adjacent to zinc finger domain 1B
See related
Ensembl:ENSCSAG00000018168
Gene type
protein coding
RefSeq status
MODEL
Organism
Chlorocebus sabaeus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Chlorocebus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
20
Annotation release Status Assembly Chr Location
102 current Vero_WHO_p1.0 (GCF_015252025.1) Unplaced Scaffold NW_023666070.1 (6855992..6938041, complement)
100 previous assembly Chlorocebus_sabeus 1.1 (GCF_000409795.2) 28 NC_023669.1 (9533802..9617164)

NW_023666070.1Genomic Context describing neighboring genes Neighboring gene U6 spliceosomal RNA Neighboring gene FKBP prolyl isomerase family member 6 (inactive) Neighboring gene frizzled class receptor 9 Neighboring gene BAF chromatin remodeling complex subunit BCL7B Neighboring gene transducin beta like 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables histone H2AXY142 kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in chromatin remodeling IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of WICH complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
tyrosine-protein kinase BAZ1B

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Chlorocebus sabaeus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Vero_WHO_p1.0

Genomic

  1. NW_023666070.1 Reference Vero_WHO_p1.0

    Range
    6855992..6938041 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008018351.2 → XP_008016542.2  tyrosine-protein kinase BAZ1B isoform X2

    Conserved Domains (7) summary
    cd05505
    Location:1342 → 1438
    Bromo_WSTF_like; Bromodomain; Williams syndrome transcription factor-like subfamily (WSTF-like). The Williams-Beuren syndrome deletion transcript 9 is a putative transcriptional regulator. WSTF was found to play a role in vitamin D-mediated transcription as part of two ...
    smart00571
    Location:602 → 666
    DDT; domain in different transcription and chromosome remodeling factors
    cd15628
    Location:1184 → 1229
    PHD_BAZ1B; PHD finger found in bromodomain adjacent to zinc finger domain protein 1B (BAZ1B)
    pfam17380
    Location:761 → 903
    DUF5401; Family of unknown function (DUF5401)
    pfam10537
    Location:21 → 120
    WAC_Acf1_DNA_bd; ATP-utilising chromatin assembly and remodelling N-terminal
    pfam15612
    Location:725 → 765
    WHIM1; WSTF, HB1, Itc1p, MBD9 motif 1
    pfam15613
    Location:896 → 1023
    WSD; Williams-Beuren syndrome DDT (WSD), D-TOX E motif

  2. XM_008018350.2 → XP_008016541.2  tyrosine-protein kinase BAZ1B isoform X1

    Conserved Domains (7) summary
    cd05505
    Location:1344 → 1440
    Bromo_WSTF_like; Bromodomain; Williams syndrome transcription factor-like subfamily (WSTF-like). The Williams-Beuren syndrome deletion transcript 9 is a putative transcriptional regulator. WSTF was found to play a role in vitamin D-mediated transcription as part of two ...
    smart00571
    Location:604 → 668
    DDT; domain in different transcription and chromosome remodeling factors
    cd15628
    Location:1186 → 1231
    PHD_BAZ1B; PHD finger found in bromodomain adjacent to zinc finger domain protein 1B (BAZ1B)
    pfam17380
    Location:763 → 905
    DUF5401; Family of unknown function (DUF5401)
    pfam10537
    Location:21 → 120
    WAC_Acf1_DNA_bd; ATP-utilising chromatin assembly and remodelling N-terminal
    pfam15612
    Location:727 → 767
    WHIM1; WSTF, HB1, Itc1p, MBD9 motif 1
    pfam15613
    Location:898 → 1025
    WSD; Williams-Beuren syndrome DDT (WSD), D-TOX E motif
Nucleotide Protein
Heading Accession and Version

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