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NHERF1 NHERF family PDZ scaffold protein 1 [ Chlorocebus sabaeus (green monkey) ]

Gene ID: 103243077, updated on 11-Mar-2024

Summary

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Gene symbol
NHERF1
Gene description
NHERF family PDZ scaffold protein 1
See related
Ensembl:ENSCSAG00000004612
Gene type
protein coding
RefSeq status
MODEL
Organism
Chlorocebus sabaeus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Chlorocebus
Also known as
SLC9A3R1
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
6
Annotation release Status Assembly Chr Location
102 current Vero_WHO_p1.0 (GCF_015252025.1) Unplaced Scaffold NW_023666077.1 (17675824..17696157, complement)
100 previous assembly Chlorocebus_sabeus 1.1 (GCF_000409795.2) 16 NC_023657.1 (46889454..46910776, complement)

NW_023666077.1Genomic Context describing neighboring genes Neighboring gene transmembrane protein 104 Neighboring gene N-acetyltransferase 9 Neighboring gene RAB37, member RAS oncogene family Neighboring gene CD300 molecule like family member f Neighboring gene CD300e molecule

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein-membrane adaptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables signaling receptor binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein localization to plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in apical plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
Na(+)/H(+) exchange regulatory cofactor NHE-RF1
Names
SLC9A3 regulator 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Chlorocebus sabaeus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Vero_WHO_p1.0

Genomic

  1. NW_023666077.1 Reference Vero_WHO_p1.0

    Range
    17675824..17696157 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008011851.2 → XP_008010042.1  Na(+)/H(+) exchange regulatory cofactor NHE-RF1

    See identical proteins and their annotated locations for XP_008010042.1

    UniProtKB/TrEMBL
    A0A0D9QX56
    Related
    ENSCSAP00000000945.1
    Conserved Domains (2) summary
    cd00992
    Location:12 → 91
    PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
    pfam09007
    Location:235 → 358
    EBP50_C; EBP50, C-terminal
Nucleotide Protein
Heading Accession and Version

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