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HMGB2 high mobility group box 2 [ Chlorocebus sabaeus (green monkey) ]

Gene ID: 103236533, updated on 11-Mar-2024

Summary

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Gene symbol
HMGB2
Gene description
high mobility group box 2
See related
Ensembl:ENSCSAG00000003100
Gene type
protein coding
RefSeq status
MODEL
Organism
Chlorocebus sabaeus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Chlorocebus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
5
Annotation release Status Assembly Chr Location
102 current Vero_WHO_p1.0 (GCF_015252025.1) Unplaced Scaffold NW_023666037.1 (99454586..99458916, complement)
100 previous assembly Chlorocebus_sabeus 1.1 (GCF_000409795.2) 7 NC_023648.1 (119440089..119442806, complement)

NW_023666037.1Genomic Context describing neighboring genes Neighboring gene polypeptide N-acetylgalactosaminyltransferase like 6 Neighboring gene uncharacterized LOC103236526 Neighboring gene polypeptide N-acetylgalactosaminyltransferase 7 Neighboring gene uncharacterized LOC119622191 Neighboring gene heterogeneous nuclear ribonucleoprotein A1-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding, bending IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
high mobility group protein B2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Chlorocebus sabaeus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Vero_WHO_p1.0

Genomic

  1. NW_023666037.1 Reference Vero_WHO_p1.0

    Range
    99454586..99458916 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008000272.2 → XP_007998463.1  high mobility group protein B2

    See identical proteins and their annotated locations for XP_007998463.1

    UniProtKB/TrEMBL
    A0A0D9S252
    Related
    ENSCSAP00000014941.1
    Conserved Domains (2) summary
    pfam00505
    Location:95 → 162
    HMG_box; HMG (high mobility group) box
    pfam09011
    Location:6 → 78
    HMG_box_2; HMG-box domain

  2. XM_008000274.2 → XP_007998465.1  high mobility group protein B2

    See identical proteins and their annotated locations for XP_007998465.1

    UniProtKB/TrEMBL
    A0A0D9S252
    Conserved Domains (2) summary
    pfam00505
    Location:95 → 162
    HMG_box; HMG (high mobility group) box
    pfam09011
    Location:6 → 78
    HMG_box_2; HMG-box domain
Nucleotide Protein
Heading Accession and Version

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