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SEMA3C semaphorin 3C [ Chlorocebus sabaeus (green monkey) ]

Gene ID: 103226646, updated on 11-Mar-2024

Summary

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Gene symbol
SEMA3C
Gene description
semaphorin 3C
See related
Ensembl:ENSCSAG00000011909
Gene type
protein coding
RefSeq status
MODEL
Organism
Chlorocebus sabaeus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Chlorocebus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
20
Annotation release Status Assembly Chr Location
102 current Vero_WHO_p1.0 (GCF_015252025.1) Unplaced Scaffold NW_023666042.1 (35792898..35971861, complement)
100 previous assembly Chlorocebus_sabeus 1.1 (GCF_000409795.2) 21 NC_023662.1 (67974074..68154383)

NW_023666042.1Genomic Context describing neighboring genes Neighboring gene 60S ribosomal protein L4-like Neighboring gene CD36 molecule (CD36 blood group) Neighboring gene keratin, type I cytoskeletal 18-like Neighboring gene hepatocyte growth factor

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables chemorepellent activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables semaphorin receptor binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in axon guidance IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative chemotaxis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of axon extension involved in axon guidance IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in neural crest cell migration IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of cell migration IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in semaphorin-plexin signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
semaphorin-3C

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Chlorocebus sabaeus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Vero_WHO_p1.0

Genomic

  1. NW_023666042.1 Reference Vero_WHO_p1.0

    Range
    35792898..35971861 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_007982361.2 → XP_007980552.1  semaphorin-3C

    UniProtKB/TrEMBL
    A0A0D9RHL4
    Related
    ENSCSAP00000008103.1
    Conserved Domains (3) summary
    cd11251
    Location:45 → 514
    Sema_3C; The Sema domain, a protein interacting module, of semaphorin 3C (Sema3C)
    smart00423
    Location:513 → 550
    PSI; domain found in Plexins, Semaphorins and Integrins
    cd05871
    Location:574 → 664
    Ig_Sema3; Immunoglobulin (Ig)-like domain of class III semaphorin Sema3

  2. XM_038004545.1 → XP_037860473.1  semaphorin-3C

    UniProtKB/TrEMBL
    A0A0D9RHL4
    Conserved Domains (3) summary
    cd11251
    Location:45 → 514
    Sema_3C; The Sema domain, a protein interacting module, of semaphorin 3C (Sema3C)
    smart00423
    Location:513 → 550
    PSI; domain found in Plexins, Semaphorins and Integrins
    cd05871
    Location:574 → 664
    Ig_Sema3; Immunoglobulin (Ig)-like domain of class III semaphorin Sema3

  3. XM_038004544.1 → XP_037860472.1  semaphorin-3C

    UniProtKB/TrEMBL
    A0A0D9RHL4
    Conserved Domains (3) summary
    cd11251
    Location:45 → 514
    Sema_3C; The Sema domain, a protein interacting module, of semaphorin 3C (Sema3C)
    smart00423
    Location:513 → 550
    PSI; domain found in Plexins, Semaphorins and Integrins
    cd05871
    Location:574 → 664
    Ig_Sema3; Immunoglobulin (Ig)-like domain of class III semaphorin Sema3
Nucleotide Protein
Heading Accession and Version

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