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RUNX2 RUNX family transcription factor 2 [ Chlorocebus sabaeus (green monkey) ]

Gene ID: 103221423, updated on 11-Mar-2024

Summary

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Gene symbol
RUNX2
Gene description
RUNX family transcription factor 2
See related
Ensembl:ENSCSAG00000012528
Gene type
protein coding
RefSeq status
MODEL
Organism
Chlorocebus sabaeus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Chlorocebus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
8
Annotation release Status Assembly Chr Location
102 current Vero_WHO_p1.0 (GCF_015252025.1) Unplaced Scaffold NW_023666044.1 (45423449..45552140)
100 previous assembly Chlorocebus_sabeus 1.1 (GCF_000409795.2) 17 NC_023658.1 (26679386..26807812, complement)

NW_023666044.1Genomic Context describing neighboring genes Neighboring gene cell division cycle 5 like Neighboring gene SPT3 homolog, SAGA and STAGA complex component Neighboring gene pre-mRNA-splicing factor RBM22-like Neighboring gene U6 spliceosomal RNA Neighboring gene U6 spliceosomal RNA Neighboring gene chloride intracellular channel 5

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in hemopoiesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in neuron differentiation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of cell differentiation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
runt-related transcription factor 2
Names
runt related transcription factor 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Chlorocebus sabaeus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Vero_WHO_p1.0

Genomic

  1. NW_023666044.1 Reference Vero_WHO_p1.0

    Range
    45423449..45552140
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_007972361.2 → XP_007970552.1  runt-related transcription factor 2 isoform X1

    See identical proteins and their annotated locations for XP_007970552.1

    Conserved Domains (2) summary
    pfam00853
    Location:96 → 217
    Runt; Runt domain
    pfam08504
    Location:417 → 508
    RunxI; Runx inhibition domain

  2. XM_007972363.2 → XP_007970554.1  runt-related transcription factor 2 isoform X2

    See identical proteins and their annotated locations for XP_007970554.1

    Related
    ENSCSAP00000008664.1
    Conserved Domains (2) summary
    pfam00853
    Location:96 → 217
    Runt; Runt domain
    pfam08504
    Location:395 → 486
    RunxI; Runx inhibition domain

  3. XM_007972366.2 → XP_007970557.1  runt-related transcription factor 2 isoform X3

    Conserved Domains (2) summary
    pfam00853
    Location:96 → 216
    Runt; Runt domain
    pfam08504
    Location:359 → 450
    RunxI; Runx inhibition domain

  4. XM_038005646.1 → XP_037861574.1  runt-related transcription factor 2 isoform X4

    Conserved Domains (1) summary
    pfam00853
    Location:92 → 218
    Runt; Runt domain
Nucleotide Protein
Heading Accession and Version

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