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CDH23 cadherin related 23 [ Orycteropus afer afer ]

Gene ID: 103196889, updated on 11-Mar-2024

Summary

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Gene symbol
CDH23
Gene description
cadherin related 23
Gene type
protein coding
RefSeq status
MODEL
Organism
Orycteropus afer afer (sub-species: afer)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Afrotheria; Tubulidentata; Orycteropodidae; Orycteropus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
69
Annotation release Status Assembly Chr Location
101 current OryAfe1.0 (GCF_000298275.1) Unplaced Scaffold NW_006921657.1 (5159833..5701953, complement)

NW_006921657.1Genomic Context describing neighboring genes Neighboring gene carbohydrate sulfotransferase 3 Neighboring gene prosaposin Neighboring gene chromosome unknown C10orf105 homolog Neighboring gene solute carrier family 29 member 3 Neighboring gene unc-5 netrin receptor B

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006921657 Unplaced Scaffold Reference OryAfe1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in homophilic cell adhesion via plasma membrane adhesion molecules IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cadherin-23

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Orycteropus afer afer Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference OryAfe1.0 Primary Assembly

Genomic

  1. NW_006921657.1 Reference OryAfe1.0 Primary Assembly

    Range
    5159833..5701953 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_042780917.1 → XP_042636851.1  cadherin-23

    UniProtKB/TrEMBL
    A0A8B6ZUT4
    Conserved Domains (1) summary
    cd11304
    Location:1516 → 1613
    Cadherin_repeat; Cadherin tandem repeat domain
Nucleotide Protein
Heading Accession and Version

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