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GLI2 GLI family zinc finger 2 [ Orycteropus afer afer ]

Gene ID: 103194449, updated on 11-Mar-2024

Summary

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Gene symbol
GLI2
Gene description
GLI family zinc finger 2
Gene type
protein coding
RefSeq status
MODEL
Organism
Orycteropus afer afer (sub-species: afer)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Afrotheria; Tubulidentata; Orycteropodidae; Orycteropus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
13
Annotation release Status Assembly Chr Location
101 current OryAfe1.0 (GCF_000298275.1) Unplaced Scaffold NW_006921591.1 (18633681..18949706)

NW_006921591.1Genomic Context describing neighboring genes Neighboring gene 60S ribosomal protein L17-like Neighboring gene inhibin subunit beta B Neighboring gene cytosol aminopeptidase-like Neighboring gene transcription factor CP2 like 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006921591 Unplaced Scaffold Reference OryAfe1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in smoothened signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
zinc finger protein GLI2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Orycteropus afer afer Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference OryAfe1.0 Primary Assembly

Genomic

  1. NW_006921591.1 Reference OryAfe1.0 Primary Assembly

    Range
    18633681..18949706
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_042780483.1 → XP_042636417.1  zinc finger protein GLI2

    UniProtKB/TrEMBL
    A0A8B6ZLS0
    Conserved Domains (4) summary
    PHA03307
    Location:641 → 864
    PHA03307; transcriptional regulator ICP4; Provisional
    COG5048
    Location:313 → 549
    COG5048; FOG: Zn-finger [General function prediction only]
    COG5189
    Location:482 → 572
    SFP1; Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]
    sd00017
    Location:488 → 510
    ZF_C2H2; C2H2 Zn finger [structural motif]
Nucleotide Protein
Heading Accession and Version

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