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fbxl21p F-box and leucine rich repeat protein 21 [ Callorhinchus milii (elephant shark) ]

Gene ID: 103183700, updated on 7-Dec-2023

Summary

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Gene symbol
fbxl21p
Gene description
F-box and leucine rich repeat protein 21
See related
Ensembl:ENSCMIG00000006494
Gene type
protein coding
RefSeq status
MODEL
Organism
Callorhinchus milii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Chondrichthyes; Holocephali; Chimaeriformes; Callorhinchidae; Callorhinchus
Also known as
fbxl21
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Genomic context

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Location:
chromosome: Un
Exon count:
7
Annotation release Status Assembly Chr Location
101 current IMCB_Cmil_1.0 (GCF_018977255.1) Unplaced Scaffold NW_024704754.1 (2233751..2243114, complement)
100 previous assembly Callorhinchus_milii-6.1.3 (GCF_000165045.1) Unplaced Scaffold NW_006890140.1 (1736369..1745482)

NW_024704754.1Genomic Context describing neighboring genes Neighboring gene transforming growth factor, beta-induced Neighboring gene uncharacterized LOC103183699 Neighboring gene uncharacterized LOC121850047 Neighboring gene solute carrier family 25 member 48

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Elephant shark genome provides unique insights into gnathostome evolution. Venkatesh B, et al. Nature, 2014 Jan 9. PMID 24402279, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in G2/M transition of mitotic cell cycle IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in SCF-dependent proteasomal ubiquitin-dependent protein catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in entrainment of circadian clock by photoperiod IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of cell cycle IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of SCF ubiquitin ligase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
F-box/LRR-repeat protein 3
Names
f-box/LRR-repeat protein 21-like protein
f-box/LRR-repeat protein 3-like protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Callorhinchus milii Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference IMCB_Cmil_1.0 Primary Assembly

Genomic

  1. NW_024704754.1 Reference IMCB_Cmil_1.0 Primary Assembly

    Range
    2233751..2243114 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_007901322.2 → XP_007899513.1  F-box/LRR-repeat protein 3 isoform X1

    UniProtKB/TrEMBL
    A0A4W3H7I2, V9KGG5
    Related
    ENSCMIP00000012798.1
    Conserved Domains (3) summary
    cd09293
    Location:338 → 421
    AMN1; Antagonist of mitotic exit network protein 1
    sd00034
    Location:194 → 219
    LRR_AMN1; leucine-rich repeat [structural motif]
    pfam12937
    Location:56 → 99
    F-box-like; F-box-like

  2. XM_042339905.1 → XP_042195839.1  F-box/LRR-repeat protein 3 isoform X2

    UniProtKB/TrEMBL
    V9KGG5
    Conserved Domains (3) summary
    cd09293
    Location:318 → 401
    AMN1; Antagonist of mitotic exit network protein 1
    sd00034
    Location:174 → 199
    LRR_AMN1; leucine-rich repeat [structural motif]
    pfam12937
    Location:36 → 79
    F-box-like

  3. XM_042339904.1 → XP_042195838.1  F-box/LRR-repeat protein 3 isoform X2

    UniProtKB/TrEMBL
    V9KGG5
    Conserved Domains (3) summary
    cd09293
    Location:318 → 401
    AMN1; Antagonist of mitotic exit network protein 1
    sd00034
    Location:174 → 199
    LRR_AMN1; leucine-rich repeat [structural motif]
    pfam12937
    Location:36 → 79
    F-box-like

  4. XM_007901323.2 → XP_007899514.1  F-box/LRR-repeat protein 3 isoform X2

    See identical proteins and their annotated locations for XP_007899514.1

    UniProtKB/TrEMBL
    V9KGG5
    Conserved Domains (3) summary
    cd09293
    Location:318 → 401
    AMN1; Antagonist of mitotic exit network protein 1
    sd00034
    Location:174 → 199
    LRR_AMN1; leucine-rich repeat [structural motif]
    pfam12937
    Location:36 → 79
    F-box-like

  5. XM_007901324.2 → XP_007899515.1  F-box/LRR-repeat protein 3 isoform X2

    See identical proteins and their annotated locations for XP_007899515.1

    UniProtKB/TrEMBL
    V9KGG5
    Related
    ENSCMIP00000012801.1
    Conserved Domains (3) summary
    cd09293
    Location:318 → 401
    AMN1; Antagonist of mitotic exit network protein 1
    sd00034
    Location:174 → 199
    LRR_AMN1; leucine-rich repeat [structural motif]
    pfam12937
    Location:36 → 79
    F-box-like

  6. XM_042339903.1 → XP_042195837.1  F-box/LRR-repeat protein 3 isoform X2

    UniProtKB/TrEMBL
    V9KGG5
    Conserved Domains (3) summary
    cd09293
    Location:318 → 401
    AMN1; Antagonist of mitotic exit network protein 1
    sd00034
    Location:174 → 199
    LRR_AMN1; leucine-rich repeat [structural motif]
    pfam12937
    Location:36 → 79
    F-box-like
Nucleotide Protein
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