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focad focadhesin [ Callorhinchus milii (elephant shark) ]

Gene ID: 103182851, updated on 11-Mar-2024

Summary

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Gene symbol
focad
Gene description
focadhesin
See related
Ensembl:ENSCMIG00000011894
Gene type
protein coding
RefSeq status
MODEL
Organism
Callorhinchus milii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Chondrichthyes; Holocephali; Chimaeriformes; Callorhinchidae; Callorhinchus
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: Un
Exon count:
44
Annotation release Status Assembly Chr Location
101 current IMCB_Cmil_1.0 (GCF_018977255.1) Unplaced Scaffold NW_024704773.1 (317983..419367, complement)
100 previous assembly Callorhinchus_milii-6.1.3 (GCF_000165045.1) Unplaced Scaffold NW_006890128.1 (2000085..2087917, complement)

NW_024704773.1Genomic Context describing neighboring genes Neighboring gene methylthioadenosine phosphorylase Neighboring gene 3-hydroxyacyl-CoA dehydratase 4 Neighboring gene transfer RNA valine (anticodon CAC) Neighboring gene MLLT3 super elongation complex subunit Neighboring gene sodium/potassium/calcium exchanger 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in regulation of post-transcriptional gene silencing IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LOW QUALITY PROTEIN: focadhesin

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Callorhinchus milii Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference IMCB_Cmil_1.0 Primary Assembly

Genomic

  1. NW_024704773.1 Reference IMCB_Cmil_1.0 Primary Assembly

    Range
    317983..419367 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_042345172.1 → XP_042201106.1  LOW QUALITY PROTEIN: focadhesin

    UniProtKB/TrEMBL
    A0A4W3J5Y2
    Conserved Domains (2) summary
    pfam11229
    Location:1224 → 1811
    Focadhesin
    pfam12530
    Location:492 → 716
    DUF3730; Protein of unknown function (DUF3730)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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