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med20 mediator complex subunit 20 [ Callorhinchus milii (elephant shark) ]

Gene ID: 103182471, updated on 11-Mar-2024

Summary

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Gene symbol
med20
Gene description
mediator complex subunit 20
See related
Ensembl:ENSCMIG00000002062
Gene type
protein coding
RefSeq status
MODEL
Organism
Callorhinchus milii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Chondrichthyes; Holocephali; Chimaeriformes; Callorhinchidae; Callorhinchus
Orthologs
human zebrafish all
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Genomic context

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See med20 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
5
Annotation release Status Assembly Chr Location
101 current IMCB_Cmil_1.0 (GCF_018977255.1) Unplaced Scaffold NW_024704760.1 (2484150..2490214)
100 previous assembly Callorhinchus_milii-6.1.3 (GCF_000165045.1) Unplaced Scaffold NW_006890123.1 (2569323..2575373)

NW_024704760.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC103182470 Neighboring gene bystin-like Neighboring gene ubiquitin specific peptidase 49 Neighboring gene translocase of outer mitochondrial membrane 6 homolog (yeast)

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Elephant shark genome provides unique insights into gnathostome evolution. Venkatesh B, et al. Nature, 2014 Jan 9. PMID 24402279, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables transcription coactivator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of mediator complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
mediator of RNA polymerase II transcription subunit 20
Names
mediator of RNA polymerase II transcription subunit 20-like protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Callorhinchus milii Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference IMCB_Cmil_1.0 Primary Assembly

Genomic

  1. NW_024704760.1 Reference IMCB_Cmil_1.0 Primary Assembly

    Range
    2484150..2490214
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_007899504.2 → XP_007897695.1  mediator of RNA polymerase II transcription subunit 20 isoform X1

    See identical proteins and their annotated locations for XP_007897695.1

    UniProtKB/TrEMBL
    A0A4W3GK45, V9KTV6
    Related
    ENSCMIP00000003430.1
    Conserved Domains (1) summary
    pfam08612
    Location:1 → 197
    Med20; TATA-binding related factor (TRF) of subunit 20 of Mediator complex

  2. XM_042342232.1 → XP_042198166.1  mediator of RNA polymerase II transcription subunit 20 isoform X2

Nucleotide Protein
Heading Accession and Version

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