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oxsm 3-oxoacyl-ACP synthase, mitochondrial [ Callorhinchus milii (elephant shark) ]

Gene ID: 103179949, updated on 11-Mar-2024

Summary

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Gene symbol
oxsm
Gene description
3-oxoacyl-ACP synthase, mitochondrial
See related
Ensembl:ENSCMIG00000015881
Gene type
protein coding
RefSeq status
MODEL
Organism
Callorhinchus milii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Chondrichthyes; Holocephali; Chimaeriformes; Callorhinchidae; Callorhinchus
Orthologs
human zebrafish all
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Genomic context

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See oxsm in Genome Data Viewer
Location:
chromosome: Un
Exon count:
6
Annotation release Status Assembly Chr Location
101 current IMCB_Cmil_1.0 (GCF_018977255.1) Unplaced Scaffold NW_024704743.1 (45274681..45283797)
100 previous assembly Callorhinchus_milii-6.1.3 (GCF_000165045.1) Unplaced Scaffold NW_006890093.1 (4727287..4736194)

NW_024704743.1Genomic Context describing neighboring genes Neighboring gene retinoic acid receptor beta Neighboring gene transfer RNA alanine (anticodon CGC) Neighboring gene DNA topoisomerase II beta Neighboring gene N-glycanase 1 Neighboring gene transfer RNA proline (anticodon UGG) Neighboring gene leucine rich repeat containing 3B

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Elephant shark genome provides unique insights into gnathostome evolution. Venkatesh B, et al. Nature, 2014 Jan 9. PMID 24402279, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 3-oxoacyl-[acyl-carrier-protein] synthase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in fatty acid biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
3-oxoacyl-[acyl-carrier-protein] synthase, mitochondrial
Names
3-oxoacyl-(acyl-carrier-protein) synthase, mitochondrial-like protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Callorhinchus milii Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference IMCB_Cmil_1.0 Primary Assembly

Genomic

  1. NW_024704743.1 Reference IMCB_Cmil_1.0 Primary Assembly

    Range
    45274681..45283797
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_007895504.2 → XP_007893695.1  3-oxoacyl-[acyl-carrier-protein] synthase, mitochondrial

    See identical proteins and their annotated locations for XP_007893695.1

    UniProtKB/TrEMBL
    V9KQ98
    Conserved Domains (1) summary
    TIGR03150
    Location:40 → 457
    fabF; beta-ketoacyl-acyl-carrier-protein synthase II

  2. XM_042331898.1 → XP_042187832.1  3-oxoacyl-[acyl-carrier-protein] synthase, mitochondrial

    UniProtKB/TrEMBL
    V9KQ98
    Conserved Domains (1) summary
    TIGR03150
    Location:40 → 457
    fabF; beta-ketoacyl-acyl-carrier-protein synthase II

  3. XM_042331899.1 → XP_042187833.1  3-oxoacyl-[acyl-carrier-protein] synthase, mitochondrial

    UniProtKB/TrEMBL
    V9KQ98
    Conserved Domains (1) summary
    TIGR03150
    Location:40 → 457
    fabF; beta-ketoacyl-acyl-carrier-protein synthase II

  4. XM_007895503.2 → XP_007893694.1  3-oxoacyl-[acyl-carrier-protein] synthase, mitochondrial

    See identical proteins and their annotated locations for XP_007893694.1

    UniProtKB/TrEMBL
    V9KQ98
    Conserved Domains (1) summary
    TIGR03150
    Location:40 → 457
    fabF; beta-ketoacyl-acyl-carrier-protein synthase II

  5. XM_007895505.2 → XP_007893696.1  3-oxoacyl-[acyl-carrier-protein] synthase, mitochondrial

    See identical proteins and their annotated locations for XP_007893696.1

    UniProtKB/TrEMBL
    V9KQ98
    Conserved Domains (1) summary
    TIGR03150
    Location:40 → 457
    fabF; beta-ketoacyl-acyl-carrier-protein synthase II
Nucleotide Protein
Heading Accession and Version

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