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fancd2 FA complementation group D2 [ Poecilia formosa (Amazon molly) ]

Gene ID: 103150705, updated on 11-Mar-2024

Summary

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Gene symbol
fancd2
Gene description
FA complementation group D2
See related
Ensembl:ENSPFOG00000003183
Gene type
protein coding
RefSeq status
MODEL
Organism
Poecilia formosa
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Poeciliidae; Poeciliinae; Poecilia
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: Un
Exon count:
45
Annotation release Status Assembly Chr Location
101 current Poecilia_formosa-5.1.2 (GCF_000485575.1) Unplaced Scaffold NW_006800199.1 (736198..751979, complement)

NW_006800199.1Genomic Context describing neighboring genes Neighboring gene glutamate receptor, metabotropic 2a Neighboring gene testis expressed 264, ER-phagy receptor a Neighboring gene uncharacterized LOC107838462 Neighboring gene uncharacterized LOC107838463 Neighboring gene glutathione peroxidase 1b Neighboring gene ubiquitin specific peptidase 4 (proto-oncogene)

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006800199.1 Unplaced Scaffold Reference Poecilia_formosa-5.1.2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA polymerase binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in double-strand break repair involved in meiotic recombination IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in homologous chromosome pairing at meiosis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in interstrand cross-link repair IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in mitotic intra-S DNA damage checkpoint signaling IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in condensed chromosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
Fanconi anemia group D2 protein
Names
Fanconi anemia complementation group D2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Poecilia formosa Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Poecilia_formosa-5.1.2

Genomic

  1. NW_006800199.1 Reference Poecilia_formosa-5.1.2

    Range
    736198..751979 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_016680878.1 → XP_016536364.1  Fanconi anemia group D2 protein isoform X1

    UniProtKB/TrEMBL
    A0A096LRK8

  2. XM_007570422.2 → XP_007570484.1  Fanconi anemia group D2 protein isoform X2

    See identical proteins and their annotated locations for XP_007570484.1

    UniProtKB/TrEMBL
    A0A087XEV3, A0A096LRK8
    Related
    ENSPFOP00000004306.2, ENSPFOT00000004314.2
    Conserved Domains (1) summary
    cl17018
    Location:39 → 1402
    FANC; Fanconi anemia ID complex proteins FANCI and FANCD2

  3. XM_016680879.1 → XP_016536365.1  Fanconi anemia group D2 protein isoform X1

    UniProtKB/TrEMBL
    A0A096LRK8
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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