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ttll5 tubulin tyrosine ligase-like family, member 5 [ Poecilia formosa (Amazon molly) ]

Gene ID: 103136164, updated on 11-Mar-2024

Summary

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Gene symbol
ttll5
Gene description
tubulin tyrosine ligase-like family, member 5
See related
Ensembl:ENSPFOG00000014806
Gene type
protein coding
RefSeq status
MODEL
Organism
Poecilia formosa
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Poeciliidae; Poeciliinae; Poecilia
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: Un
Exon count:
34
Annotation release Status Assembly Chr Location
101 current Poecilia_formosa-5.1.2 (GCF_000485575.1) Unplaced Scaffold NW_006799969.1 (3251975..3315464, complement)

NW_006799969.1Genomic Context describing neighboring genes Neighboring gene intraflagellar transport 43 Neighboring gene transforming growth factor, beta 3 Neighboring gene ergosterol biosynthesis 28 homolog Neighboring gene FLVCR choline and putative heme transporter 2a

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006799969.1 Unplaced Scaffold Reference Poecilia_formosa-5.1.2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables tubulin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables tubulin-glutamic acid ligase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in microtubule cytoskeleton organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein polyglutamylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cilium IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
tubulin polyglutamylase TTLL5
Names
tubulin tyrosine ligase like 5

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Poecilia formosa Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Poecilia_formosa-5.1.2

Genomic

  1. NW_006799969.1 Reference Poecilia_formosa-5.1.2

    Range
    3251975..3315464 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_016670101.1 → XP_016525587.1  tubulin polyglutamylase TTLL5 isoform X2

  2. XM_016670100.1 → XP_016525586.1  tubulin polyglutamylase TTLL5 isoform X2

  3. XM_016670099.1 → XP_016525585.1  tubulin polyglutamylase TTLL5 isoform X2

  4. XM_016670098.1 → XP_016525584.1  tubulin polyglutamylase TTLL5 isoform X1

    UniProtKB/TrEMBL
    A0A087YA33
    Conserved Domains (1) summary
    pfam03133
    Location:111 → 387
    TTL; Tubulin-tyrosine ligase family

  5. XM_016670097.1 → XP_016525583.1  tubulin polyglutamylase TTLL5 isoform X1

    UniProtKB/TrEMBL
    A0A087YA33
    Conserved Domains (1) summary
    pfam03133
    Location:111 → 387
    TTL; Tubulin-tyrosine ligase family

  6. XM_007549284.2 → XP_007549346.1  tubulin polyglutamylase TTLL5 isoform X1

    See identical proteins and their annotated locations for XP_007549346.1

    UniProtKB/TrEMBL
    A0A087YA33
    Conserved Domains (1) summary
    pfam03133
    Location:111 → 387
    TTL; Tubulin-tyrosine ligase family

  7. XM_007549286.2 → XP_007549348.1  tubulin polyglutamylase TTLL5 isoform X1

    See identical proteins and their annotated locations for XP_007549348.1

    UniProtKB/TrEMBL
    A0A087YA33
    Conserved Domains (1) summary
    pfam03133
    Location:111 → 387
    TTL; Tubulin-tyrosine ligase family

  8. XM_007549283.2 → XP_007549345.1  tubulin polyglutamylase TTLL5 isoform X1

    See identical proteins and their annotated locations for XP_007549345.1

    UniProtKB/TrEMBL
    A0A087YA33
    Related
    ENSPFOP00000014886.2, ENSPFOT00000014908.2
    Conserved Domains (1) summary
    pfam03133
    Location:111 → 387
    TTL; Tubulin-tyrosine ligase family

  9. XM_016670096.1 → XP_016525582.1  tubulin polyglutamylase TTLL5 isoform X1

    UniProtKB/TrEMBL
    A0A087YA33
    Conserved Domains (1) summary
    pfam03133
    Location:111 → 387
    TTL; Tubulin-tyrosine ligase family

  10. XM_016670102.1 → XP_016525588.1  tubulin polyglutamylase TTLL5 isoform X3

Nucleotide Protein
Heading Accession and Version

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