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ubqln1 ubiquilin 1 [ Poecilia formosa (Amazon molly) ]

Gene ID: 103135467, updated on 28-Dec-2023

Summary

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Gene symbol
ubqln1
Gene description
ubiquilin 1
See related
Ensembl:ENSPFOG00000018864
Gene type
protein coding
RefSeq status
MODEL
Organism
Poecilia formosa
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Poeciliidae; Poeciliinae; Poecilia
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Genomic context

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See ubqln1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
11
Annotation release Status Assembly Chr Location
101 current Poecilia_formosa-5.1.2 (GCF_000485575.1) Unplaced Scaffold NW_006799964.1 (1497127..1502771)

NW_006799964.1Genomic Context describing neighboring genes Neighboring gene kinesin family member 27 Neighboring gene G kinase anchoring protein 1 Neighboring gene IDNK gluconokinase Neighboring gene FERM domain containing 3

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006799964.1 Unplaced Scaffold Reference Poecilia_formosa-5.1.2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables polyubiquitin modification-dependent protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in ubiquitin-dependent protein catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ubiquilin-1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Poecilia formosa Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Poecilia_formosa-5.1.2

Genomic

  1. NW_006799964.1 Reference Poecilia_formosa-5.1.2

    Range
    1497127..1502771
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_016669429.1 → XP_016524915.1  ubiquilin-1 isoform X2

    UniProtKB/TrEMBL
    A0A096MCH0

  2. XM_007548204.2 → XP_007548266.1  ubiquilin-1 isoform X1

    UniProtKB/TrEMBL
    A0A087YLT2, A0A096MCH0
    Related
    ENSPFOP00000018985.2, ENSPFOT00000019007.2
    Conserved Domains (2) summary
    cl00155
    Location:33 → 93
    UBQ; Ubiquitin-like proteins
    cl21463
    Location:504 → 534
    UBA_like_SF; UBA domain-like superfamily
Nucleotide Protein
Heading Accession and Version

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