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UCHL5 ubiquitin C-terminal hydrolase L5 [ Erinaceus europaeus (western European hedgehog) ]

Gene ID: 103128821, updated on 6-Jun-2024

Summary

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Gene symbol
UCHL5
Gene description
ubiquitin C-terminal hydrolase L5
Gene type
protein coding
RefSeq status
MODEL
Organism
Erinaceus europaeus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Eulipotyphla; Erinaceidae; Erinaceinae; Erinaceus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 19
Exon count:
12
Annotation release Status Assembly Chr Location
RS_2023_10 current mEriEur2.1 (GCF_950295315.1) 19 NC_080180.1 (12844138..12886554, complement)
101 previous assembly EriEur2.0 (GCF_000296755.1) Unplaced Scaffold NW_006803961.1 (6202151..6253768)

Chromosome 19 - NC_080180.1Genomic Context describing neighboring genes Neighboring gene regulator of G protein signaling 13 Neighboring gene regulator of G protein signaling 2 Neighboring gene U6 spliceosomal RNA Neighboring gene Ro60, Y RNA binding protein Neighboring gene glutaredoxin 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cysteine-type deubiquitinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables proteasome binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein deubiquitination IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in ubiquitin-dependent protein catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of Ino80 complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ubiquitin carboxyl-terminal hydrolase isozyme L5
Names
ubiquitin carboxyl-terminal hydrolase L5

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_950295315.1-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mEriEur2.1

Genomic

  1. NC_080180.1 Reference mEriEur2.1

    Range
    12844138..12886554 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_060178478.1 → XP_060034461.1  ubiquitin carboxyl-terminal hydrolase isozyme L5 isoform X2

  2. XM_060178477.1 → XP_060034460.1  ubiquitin carboxyl-terminal hydrolase isozyme L5 isoform X1

    UniProtKB/TrEMBL
    A0A1S3ARS4

  3. XM_060178482.1 → XP_060034465.1  ubiquitin carboxyl-terminal hydrolase isozyme L5 isoform X4

  4. XM_060178481.1 → XP_060034464.1  ubiquitin carboxyl-terminal hydrolase isozyme L5 isoform X4

  5. XM_060178480.1 → XP_060034463.1  ubiquitin carboxyl-terminal hydrolase isozyme L5 isoform X3

RNA

  1. XR_009546304.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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