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JAG1 jagged canonical Notch ligand 1 [ Lipotes vexillifer (Yangtze River dolphin) ]

Gene ID: 103089749, updated on 11-Mar-2024

Summary

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Gene symbol
JAG1
Gene description
jagged canonical Notch ligand 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Lipotes vexillifer
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Lipotidae; Lipotes
Orthologs
human mouse all
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Genomic context

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See JAG1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
26
Annotation release Status Assembly Chr Location
100 current Lipotes_vexillifer_v1 (GCF_000442215.1) Unplaced Scaffold NW_006775780.1 (3573058..3609573)

NW_006775780.1Genomic Context describing neighboring genes Neighboring gene ctenidin-1-like Neighboring gene histidine triad nucleotide-binding protein 2, mitochondrial-like Neighboring gene SLX4 interacting protein Neighboring gene MKKS centrosomal shuttling protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006775780 unplaced scaffold reference Lipotes_vexillifer_v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables Notch binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in Notch signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cell communication IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in multicellular organism development IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein jagged-1
Names
jagged 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Lipotes vexillifer Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Lipotes_vexillifer_v1 Primary Assembly

Genomic

  1. NW_006775780.1 Reference Lipotes_vexillifer_v1 Primary Assembly

    Range
    3573058..3609573
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_007450205.1 → XP_007450267.1  protein jagged-1

    UniProtKB/TrEMBL
    A0A340WRL6
    Conserved Domains (5) summary
    smart00215
    Location:863 → 930
    VWC_out; von Willebrand factor (vWF) type C domain
    cd00054
    Location:629 → 665
    EGF_CA; Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the ...
    pfam00008
    Location:748 → 777
    EGF; EGF-like domain
    pfam01414
    Location:167 → 229
    DSL; Delta serrate ligand
    pfam07657
    Location:32 → 106
    MNNL; N terminus of Notch ligand
Nucleotide Protein
Heading Accession and Version

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