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SPPL2B signal peptide peptidase like 2B [ Lipotes vexillifer (Yangtze River dolphin) ]

Gene ID: 103088742, updated on 11-Mar-2024

Summary

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Gene symbol
SPPL2B
Gene description
signal peptide peptidase like 2B
Gene type
protein coding
RefSeq status
MODEL
Organism
Lipotes vexillifer
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Lipotidae; Lipotes
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
12
Annotation release Status Assembly Chr Location
100 current Lipotes_vexillifer_v1 (GCF_000442215.1) Unplaced Scaffold NW_006787630.1 (1312269..1321659)

NW_006787630.1Genomic Context describing neighboring genes Neighboring gene leucine rich repeat and Ig domain containing 3 Neighboring gene LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated Neighboring gene proline-rich protein 2-like Neighboring gene transmembrane serine protease 9

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006787630 unplaced scaffold reference Lipotes_vexillifer_v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables aspartic endopeptidase activity, intramembrane cleaving IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in membrane protein proteolysis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi-associated vesicle membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytoplasmic side of endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in lumenal side of endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in lysosomal membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
signal peptide peptidase like 2B

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Lipotes vexillifer Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Lipotes_vexillifer_v1 Primary Assembly

Genomic

  1. NW_006787630.1 Reference Lipotes_vexillifer_v1 Primary Assembly

    Range
    1312269..1321659
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_007472197.1 → XP_007472259.1  signal peptide peptidase like 2B

    UniProtKB/TrEMBL
    A0A340YJF6
    Conserved Domains (2) summary
    pfam04258
    Location:124 → 444
    Peptidase_A22B; Signal peptide peptidase
    cl10459
    Location:16 → 74
    Peptidases_S8_S53; Peptidase domain in the S8 and S53 families
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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