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CLDN19 claudin 19 [ Lipotes vexillifer (Yangtze River dolphin) ]

Gene ID: 103081675, updated on 11-Mar-2024

Summary

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Gene symbol
CLDN19
Gene description
claudin 19
Gene type
protein coding
RefSeq status
MODEL
Organism
Lipotes vexillifer
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Lipotidae; Lipotes
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
5
Annotation release Status Assembly Chr Location
100 current Lipotes_vexillifer_v1 (GCF_000442215.1) Unplaced Scaffold NW_006779881.1 (415758..420303)

NW_006779881.1Genomic Context describing neighboring genes Neighboring gene chromosome unknown open reading frame, human C1orf50 Neighboring gene mitochondrial intermembrane space import and assembly protein 40-like Neighboring gene prolyl 3-hydroxylase 1 Neighboring gene Y-box binding protein 1 Neighboring gene peptidylprolyl isomerase H

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006779881 unplaced scaffold reference Lipotes_vexillifer_v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables structural molecule activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in bicellular tight junction assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in bicellular tight junction IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
claudin-19

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Lipotes vexillifer Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Lipotes_vexillifer_v1 Primary Assembly

Genomic

  1. NW_006779881.1 Reference Lipotes_vexillifer_v1 Primary Assembly

    Range
    415758..420303
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_007453010.1 → XP_007453072.1  claudin-19

    UniProtKB/TrEMBL
    A0A340WZG2
    Conserved Domains (1) summary
    cl21598
    Location:4 → 182
    PMP22_Claudin; PMP-22/EMP/MP20/Claudin family

  2. XM_007453011.1 → XP_007453073.1  claudin-19

    UniProtKB/TrEMBL
    A0A340WUB9
    Conserved Domains (1) summary
    cl21598
    Location:4 → 188
    PMP22_Claudin; PMP-22/EMP/MP20/Claudin family
Nucleotide Protein
Heading Accession and Version

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