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HOXA9 homeobox A9 [ Lipotes vexillifer (Yangtze River dolphin) ]

Gene ID: 103079445, updated on 11-Mar-2024

Summary

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Gene symbol
HOXA9
Gene description
homeobox A9
Gene type
protein coding
RefSeq status
MODEL
Organism
Lipotes vexillifer
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Lipotidae; Lipotes
Orthologs
human all
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Genomic context

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Location:
chromosome: Un
Exon count:
3
Annotation release Status Assembly Chr Location
100 current Lipotes_vexillifer_v1 (GCF_000442215.1) Unplaced Scaffold NW_006792921.1 (2893647..2896495, complement)

NW_006792921.1Genomic Context describing neighboring genes Neighboring gene homeobox A6 Neighboring gene homeobox A7 Neighboring gene homeobox A10 Neighboring gene homeobox A11

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006792921 unplaced scaffold reference Lipotes_vexillifer_v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in anterior/posterior pattern specification IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in embryonic skeletal system morphogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in proximal/distal pattern formation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
homeobox protein Hox-A9

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Lipotes vexillifer Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Lipotes_vexillifer_v1 Primary Assembly

Genomic

  1. NW_006792921.1 Reference Lipotes_vexillifer_v1 Primary Assembly

    Range
    2893647..2896495 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_007466081.1 → XP_007466143.1  homeobox protein Hox-A9

    UniProtKB/TrEMBL
    A0A340XYB7
    Conserved Domains (2) summary
    pfam00046
    Location:210 → 263
    Homeobox; Homeobox domain
    pfam04617
    Location:1 → 194
    Hox9_act; Hox9 activation region
Nucleotide Protein
Heading Accession and Version

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